| mature miRNA: TAGTATAAAGTTGAGTCATGT species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|143801168|gb|CJ967089.1|CJ967089 CJ967089 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul6e17 TAGTATAAAGTTGAGTCATGT EST sequence (targeted fragment marked with yellow): TAAGCAATTTACAAGCGAATTCCGCTGATAACGTTTCATGGCAAAACAGAGTAAATACNGCGCAAAGTTTTGAAATCATTNTNTGATCCGNGGAGCTTTCGGTTGGATGCATGGTCCAACTTTATGCTGTTCTATGANGTCTCCTCCAATTAAAAATGCNCTNTTNTTCTCNCGGCGNGATTACAAAGGGAACGTCATAGGCAAAAGGGAGGGCNCAAGCAACATAACAGTTGAAGGAAATTTCAACTATCAGATAGCCTATCATGCCCTNTGCCATAAAACCTTTTGTAGCCNGGGAGGGAGGGAGATGGTGTATATTTACTTGTCCAAAAAAAGAGGGTACNGTATAATTTTTCGGTNTCAAGTGCTGCAGTGCCTGCTATTGTTGCNCTACCNTGTTACTGATTTTTTTTTTAAATTGTGAGGCTTCAAAAGGTCAGGAAACTTATTCAACATGGACTTATTTGTCGGTGATTGCAGCTATGAAGATTGATACTTCCCATATCTCTCTGCTTTTTTTTTTACAGAATGTAATGCTCCCTCTCTCTCAAAATGTAAGACGTTTCTTGACACTAATAGTACAAGAGGGAGTACGTTATATGATGG | |||||||||
gi|143800864|gb|CJ966785.1|CJ966785 CJ966785 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul5e17 TAGTATAAAGTTGAGTCATGT EST sequence (targeted fragment marked with yellow): TAAGCAATTTACAAGCGAATTCCGCTGATAACGTTTCATGGCAAAACAGAGTAAATACAGCGCAAAGTTTTGAAATCATTCTCTGATCCGTGGAGCTTTCGGTTGGATGCATGGTCCAACTTTATGCTGTTCTATGATGTCTCCTCCAATTAAAAATGCACTNTTNTTCTCNCGGCGTGATTACAAAGGGAACGTCATAGGCAAAAGGGAGGGCNCAAGCAACATAACAGTTGAAGGAAATTTCAACTATCAGATAGCCTATCATGCCCTNTGCCATAAAACCTTTTGTAGCCNGGGAGGGAGGGAGATGGTGTATATTTACTTGTCCAAAAAAAGAGGGTACNGTATAATTTTTCGGTCTCAAGTGCTGCAGTGCCTGCTATTGTTGCNCTACCNTGTTACTGATTTTTTTTTTAAATTGTGAGGCTTCAAAAGGTCAGGAAACTTATTCAACATGGACTTATTTGTCGGTGATTGCAGCTATGAAGATTGATACTTCCCATATCTCTCTGCTTTTTTTTTTACAGAATGTAATGCTCCCTCTCTCTCAAAATGTAAGACGTTTCTTGACACTAATAGTACAAGAGGGAGTACGTTATATGATG | |||||||||
gi|222371431|gb|GH732851.1|GH732851 OV.113J09F010313 OV Triticum aestivum cDNA clone OV113J09, mRNA sequence TAGTATAAAGTTGAGTCATGT EST sequence (targeted fragment marked with yellow): ACATCCTCCGTTCCAAAATACATGACTCAACTTTGTACTAACTTAGTACAAAATTGAGTCATCTATTTTGGAACGGAGGGAGTACTTCAGAATCGATGGCTTGAATTAAGTTGGCATGCTACCTGAGGATTGAAATAATGTGTACTATTAGATTTTGCTGTTTCAGATTGAACATCGATTTATTCACAGGAAAAAATAGATTGAACATAGCTTTACTGTAGTATTACATTCCAACATACTTTACACGCTCCTAAAAAATCAAGTGCAAAATTACATTAGAGGGGAAATTCAGTAATTGGTTTCTGAAACTAAGTGACATGCACATGTAAAGTTTGTTTGCTTGATGTGCTTTGTATGCATACGTATTGTAGCCATATATATCAACATGTGACAATAGTATTGCGTTTGCCTTGAACACTAAATTCAGTCTTTCAAAAAAAGAAATTTTGTAGCCATAGTCAAGTCTGCTGCCCTGTGCATGAACCAAACACAACATTAGCTTCCTTTTGAATCCTGAAGGCACCAACTACAAATTATTTTAGTGTACGAAAATCAATCATCAAAGTTGCAAAATTGTGTGATTACGAGGAATCTCGTTTCTTAAACATGTGCATCTTTAGAAAATTCTGTATTCATTAATCATTATGAGTGCACAAATAACCAGTAAAATTGTTCTACATGAAGACCAGAGAAG | |||||||||
gi|143799086|gb|CJ965007.1|CJ965007 CJ965007 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul37g1 TAGTATAAAGTTGAGTCATGT EST sequence (targeted fragment marked with yellow): GGGTCATGGAGATGCACCTCGCCGGCGAGCTCGTGCCCATGCTCAAGGCCGCCGGCGCGCTCTGGCTCTAGTGAGACAATACTTGCATGCTCGCTCAGTATGCAATGCTAGCCTTTTTGACAGTATATATAGAATAACAAGAGATCTAACAGATGAAAAGCCCAGGTTTTTTAATATCCTGTGCCGGCTCCATGGGGAGAAGAGTTAAACTACCCAGCTAATCAACGGCAAGATAATTCAATACTACCCGGCCCCAACGGTAGTACGATGTACCGTAAAAAATCTCTTTATTAAACACGCATATGCATCAGCTGTCTTCTGGTAATAATATCATTCATCTTTTGTAGCGCTTGGATCTATTGTCCGTGCCCATCATCTTCCTTTGCTTACCAGTTTAACTTCTGCAAATCTTGTTCTTCTTAGAGGAGCGTATGCGTTGGATGTAGCCAAGGCGAACCCAGCTTCTGGTTGTCGAGAAGAGGAAGAAATGAGAGAGACGCGTCTAGGGGAGCGATCACGGCGCTTACTCTACCACAAATCATGTTAGCTGTATTAAGTTAGTGCTTGGCTTAGTGCTAGAATGTACTTCCACCGTATCAAAATAAGTGTCTTAACTTTATACTAATTCTAGTACAAAGTTATACTAAGATTGAGACACTTATTTAGGAATGGAGTGAGTACTAGAAGGTCTACAGACCTCACTCTTAATTATCCACCATCTCTTGATGTGTAACTGAACTGTACGAGT | |||||||||
gi|222368579|gb|GH727641.1|GH727641 G550.114A15R010903 G550 Triticum aestivum cDNA clone G550114A15, mRNA sequence TAGTATAAAGTTGAGTCATGT EST sequence (targeted fragment marked with yellow): AAACGGGGAAAGAAACGGGATGGTTCACTTAAAAGCATCAACTCAATTCAAAAGTCTAGGAAGCTTATCTGGTACTCTCTCCGTTCCAAAATAAATGACCAACTTTATACTAACTTTAGTACAAAGTTAGTACAACGTGGGGTCATCTATCTATTTCAAAACGCAGGGAGTACTCCAAAAGCCAGGTTTTCCGAAAACTACATTATATAATCCATGGACAATTGGACATCTAGCTTCTGATGGGAAAGGCTTTTCTAAAATACCTTTCCACGCATCAAAGCACATGAGCAGGAAAGCGGACCTAAACGGGATGGGGACACACAGGGATGCAGTCAGGGGGATGAAATGATGGGCTCACCAAAGATGGGATCGTACGGCCCTCCAAAGGCTGGCACAAAAAAACCCAAAAAGCCCTCCAGGAAAGGGCAGCAACAACAGCAGCAGTTTGGATTTCAGTCATTTTCCGTTAGGGCTAGGCAAAGGTCTCCGACAGGTGGGAAAAACCCAGCGGACGCGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGCTAAAGGGGGGGG | |||||||||
gi|222367054|gb|GH731612.1|GH731612 GR45.111M18R010612 GR45 Triticum aestivum cDNA clone GR45111M18, mRNA sequence TAGTATAAAGTTGAGTCATGT EST sequence (targeted fragment marked with yellow): GGAATGCATAAAAAACACAGAGAATCACACCTTACTTTATTATTAGTATAGTACATATAGATATAGATATATCTATCACGTAAGAAACAAGATCCTAATATAAGGTTTTTACATAACGCGGAAACAAAATAACAATTACTAAGTTATAGTACTCCCTCGGGTCTTAAATATATGTCTCAACTTTATACTAGGCTTTAATACGAAGTCTTGGGGAACGGTGGGCAGTTACGCAATTATAAAGGGTAGATGTAGGGCATCACGCGCGACGGCCTGAGCGGCAACTTCAACACCGTTTCGACACGGAACTGCACCTCATTCTTCAGCAGTCCTTGTGTCCTCGGAAGTCCTTGTGCTGGACTTTCCAGACTTCTTTTCTGCCAAAAACTTCTCGCAATTCCTTTTCCAGTGACCCTTGTCCTTGCCGCAAGAAGCACTCCTGTCCTCTTCACTAGGCCCGCGTCCAGGCTTCCCCTTGCGTGCCGGTCTTACTGACGCCCTTGCCATTCCGACTCTGCCCTTCTACCTCGAACCCACTGCCCTCCTCCGCCCACCATGACCGGCGCCCCACCCGGCATCCAAAACCCCGGCGAACCCGAACAATCCCGAACCAATCCCATACAGCCCTGGACCACCCGGCACACAGGCACCCCGGCCAAACCCACACACCCTGCGGCAACCCACAAGCCGAGACCAGACCAGCAACGGCGATCCAAAACCCAAAGCCCAAAGCCCCAGGGACCCACACTGCCCCTGTTGCCCGGCGCCCCTGGACACGGCCCCAGAACCCGGGAAACCAAACGCGGACCGGAAACAAACCAAGTCCCAAAA | |||||||||