| mature miRNA: CCTCCGTCCCATAATGTAAGAC species: Triticum turgidum subsp. durum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|197665522|gb|FK827367.1|FK827367 KI7RS-114 KI7RS Triticum turgidum subsp. durum cDNA similar to Glutamine-rich protein, mRNA CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): ACTCCCTCCGTCCCAAAATGTAAAACTTTTTTGACACTATGATAGTATCAAAAAACGTCTTACATTTTGGGTCGGAGGAAATACTAGTTTTAAATTGCGTGTTTACAGCCACAATGACAGGACAAGTTATCTTCAAAACATATATAATCAGATAACTAGAGACAAGTTACCAGGCACCAGCCGATGCATCCTCAAGCCTTTTCTCAAGTCGAGTGCACCTGTCTTGCCTAGAGTTCAGATCAGATTGCCACCATCGACGCCGTA | |||||||||
gi|49603340|gb|AJ716758.1|AJ716758 AJ716758 Triticum turgidum subsp. durum etiolated seedling 20 days Triticum turgidum subsp. d CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): GAATTCCGGCACGAGGGCAGGGCCGGCGGTGGATCCGAGCGGCTGGTGGTCGGTTCCCTGTGTCCGGCCTCTCCAGATCTGAAGACGCCTCCTTTGGCTCCTGCTGCGGCCTCTCCTACGCCATGTCCTACCAGATCCGGTGGACGATGTCGTGGTGGTGGGTGGGGAGCCCTGGATCGGGGTAACCTCTTGGCCGGCAGCGGCGGCCACATCGTCAACGGTGCTCCGTGCGCTGCTCCCCTTCCCGAAGGCGACGTTGAGGTCCATCTCCCTCCCCTCCCTCCCTCCCCTGCTCCCGGGTGAAAATCCACAACCTTGGTTGGGCGGCGACGGTGCCTCTNCACCTCCTTCTTGAAGGCATCGTTTTGGGTTGTGGGATGGAGGGTGGCNCTGCGGC | |||||||||
gi|164701047|gb|FD473448.1|FD473448 P12S_A07_SP6_049 frumisis1 Triticum turgidum subsp. durum cDNA clone P12S_A07_SP6_049, mRNA CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): ATGTGTATGACAGCTACTCCCTCCGTCTCAAAATATAAGAGCGTTTTTGGCACTACACTAGTGTAAAAAATGCTCTTATATTTTGGGACGGAGGGAGTATGTTTGTTTGGAG | |||||||||
gi|39730663|gb|AJ613736.1|AJ613736 AJ613736 Triticum turgidum subsp. durum etiolated seedling 20 day Triticum turgidum subsp. du CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): GAATTCGGCACGAGGACGACCTGTCGCCCCATCGCCTGTGTGACTACCTGTACACCCTATCTGAAAGATTCTCACAATTTTACACCAACTGCCAGGTTGTCGGGTCACCGGAGGAAACGAGCCGCCTGTTGCTGTGCCAAGCGTCGGCAGTCGTCATGCGGCAATGCTTCCACCTGCTGGGCATAACACCAGTGCACAAGCTATAGAAGTCGATGGATGCTCTAGTTAGTAAATTATCATTGAACTCATCTAACATGATAGGTTTAGTGGACGCGATCTTGTAAATATTACTCCCTTCGTCCCACAGTATAACTTGAAAAAGGATCTTATATTGTGGGACGGAGGGAGTAGTTGCAAATATCAGTATGTCGTCGATGCCACATAGTAGCTCGCAAGTATGTTTGTCTTTCCTACATCAGCATCAGCATAATAGCAAGGCTGTGGGATTTTATTGTTTGAAACTTTGGTGTGTTCTGGATATATGTTAGTTATAAGGGCAATACAAACGTTCACGAAAAAAAAAAAAAAAAAAAACTCGAG | |||||||||
gi|9427023|gb|BE429180.1|BE429180 MTD015.C06F990621 ITEC MTD Durum Wheat Root Library Triticum turgidum subsp. durum cDNA clone CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): GCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCACGCGTCGACGACGGCACGCCCTGCAAGCCCTGCAAGAAGCACTGATAGCACATGCTCAGAACATAAGATGTTGCACCGAGAATAAAAGCTCGGATGGGTTGAGCAGAGCCGTTGTGGTTGTACGTACACGTGTTCCATGCCCAACAACAATTGTTGTTGTCATCGTCGTCGTTATGCTTTTATCTCTCTCCAACAAAAGCTGTGGTCGTTGCTCCCTGAATAAACACATATTCCCTTCGTTTCATAATGTAAGACATTTTTTGGCACTAGTGTAGTATCAAAAAACGTCTTATATTATGGGACGGATGGAGTACTTGTGTGTCAGTGTATTGCGTCTCTGCTCAATCAAATAAAAA | |||||||||
gi|49603502|gb|AJ716920.1|AJ716920 AJ716920 Triticum turgidum subsp. durum etiolated seedling 20 days Triticum turgidum subsp. d CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): GAATTCGGCACGAGGGTGTTTGGCCCCTTGTGTTCCACATTTGTTGTGTTCTTGGGGCATGCTTCTAGTTTGTCCAAATGTCTCTTCAAGCATTTCAACCTGATGGTTTTCCAATCATGTTAGCTATTGCCTTGGTCATAGAGAAATTATCTTGAAACGTGTATGCAGTATATGAGTGATTTAGCTTTTGAACAGCAATTTTTAGAGCTATGTTCCCTGTCCTGGCACACTGTAGCTTAGGTTATTCCTATATAATACTCCCTCCGTCCCATAATGTAAGACATTTTTTGACATTACACTAGAGTCAAAAAACGTCTTACGTTATGGGACAGAGGGCGTAGTTAACGTATTCTCAGTTATGAAGCTGTCCACTTCTTTTCTGAAACTATTTCTCAAATGGAGTTCATCATTGTGGGGGATTTTCATGGGAGAAATGCAACGTGTCTTTGGCAATAGCAGTGATGTAAAGTTCCAAACAAC | |||||||||
gi|49603782|gb|AJ717200.1|AJ717200 AJ717200 Triticum turgidum subsp. durum etiolated seedling 20 days Triticum turgidum subsp. d CCTCCGTCCCATAATGTAAGAC EST sequence (targeted fragment marked with yellow): GGTTCTGAACATTGTAGCGTTTTGTCAATGTTGTTACTTTTTGCTACAAAGTATGTGGAATGGCATCTTTATGATGTTCCTGTTTGAGATAAAACTACATGTTGTCTCTATCGTGCAAGACAAATGCTACAAAAAAAAAGCATTGTATACAGTTGTCCAATGATAAAATGTACTCCCTCCGTCCCATAATGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTATATTTCAAAAATTGTAGAGCAATTAGTTCTAATGAAACATTGGCACNTTGGTCCTGATTATATATCAGATGCAGATATTCGGATTTTATTTTTGAATCTGATCTTACTTGCGGGGATGGACGTATCACGTATGGGTTCAGGTAAAACTGTTGCAACTTCTGATTGAAGAAGCTAAATTGACATGTCACAGCTCCCAGCATGTACTTCCAATAAGATGCATATCATGGTATTGGGATATATCAGCGTCTGATATATATGTGCATAAGTTGGCAGGGATATATCAGCGTCCGATATAATATATGTGCATCTGTTGGCAGAAATGTCAGATCCGCAAACTGTGATTCACCACTNGTTTTATTTTATTTTTCCTCANCATG | |||||||||