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mature miRNA: CTCCGTAAACTAATATAAGAG
species: Triticum turgidum subsp. durum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|49603113|gb|AJ716531.1|AJ716531 AJ716531 Triticum turgidum subsp. durum etiolated seedling 20 days Triticum turgidum subsp. d 

CTCCGTAAACTAATATAAGAG
||| ||||||||||||||||.
GAGACATTTGATTATATTCTT

EST sequence (targeted fragment marked with yellow):
GACGAGGCCCTGCCTGGGTGGGAGGAGGACATTTCGTCGGTGCGGGACTACGATGATCTCCCGGAGACCGCGCGTCTGTACGTGGAGAGGATAGAGGAGCTGGTTGGTATCCCTGTCCATTACATCGGTGTCGGACCTGGGCGTGATGCTCTCATATACAAATAGGGGATTTTGTCAGACATGTCTCTTATTATCTACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATTACTACTTTAGTGATCTAAACGTTCTTATATTAGTTTACAGAGGAAGTATACAAGATCCGCATTTGAGCAAATGATTCAACCCAAGTGCGTCCTTTACTGCTTCTACCANANAAAAAAAAANAANANAAAAAAAAAAAAAAACTCGAG


gi|9426659|gb|BE428816.1|BE428816 MTD011.B07F990617 ITEC MTD Durum Wheat Root Library Triticum turgidum subsp. durum cDNA clone 

CTCCGTAAACTAATATAAGAG
||| |||||||||||||||||
GAGACATTTGATTATATTCTC

EST sequence (targeted fragment marked with yellow):
TGGTGGTTGGTGGTGAGCTGACTCATGCTGTCTTATGGCAGTACCTATGTTGGTGTCATGTCTAGGAAATGGTGGCGTCCTAATGCTGTCTATGACTTGGAATTCCGTTTCTTCTGTTCGATGAGTTAGGTCTTATTGGCTGTGTAATGTTGCTTCTGAATTCAGTGGTGGTGGAGGCCGGAGGCGGATGGTCAGGCGTATTGGCTTTGTGTTGAGGCTGCTGGATTAAGAGCCTTCTTTTTTACTCCCTCTGTAATCTAATATAAAGGCGTCTAGAATACTAAAGTAGTGATCTAAAGGCTCTTATATTAGTTTACAGAGGGAGTAGCTCTAAGCGCTGTTTTGGAGCTGTCATGTTTGGACTTGGATGTAGTGTTGTGTTTGTTGGAGTTTGGTT


gi|39730474|gb|AJ613547.1|AJ613547 AJ613547 Triticum turgidum subsp. durum etiolated seedling 20 day Triticum turgidum subsp. du 

CTCCGTAAACTAATATAAGAG
||| |||||||||.|||||||
GAGACATTTGATTGTATTCTC

EST sequence (targeted fragment marked with yellow):
GAATTCGGCACGAGGCCCTGACGCGTATGTCCGCATCATCGGATTCGACAACATGCGCCAGGTGCAGTGCGTCAGCTTCATCGCCTTCAAGCCACCGGGCTGCGAGGAGTCCGGCAAGGCCTAAACAGCTCACTCACGACAGGTCATATATAAAGTGCCATTGCAGTTTTGTCAACTCTGACATTGCTTTGGGTTTTCCTTCTCCATTTATCTTTCTTATTTGTTCCTAAGAATATGTGTATGTCCATGTTCATGTACCAACATGGCTCGAGAAAGCATGCTCGTATGAGAATGCTATCGGTGGCTATGTATATGAACGGACGCATAATATTATACAATATGTCGACTATATACGTTTTAATGGTAACCAATGGAAAATATCTCCACCACCGTGCTTATTACTTCCTCTGTAAATTAATATAGAGCGTTTCGATCACTGCTTTAGTGATCTAAACGCTCTTATGTTAGTTTACAGAGGGGATACTTTTTATTAATAGTGGACGGTTGGACGTTGTCTTAGTTTGTATCCCTGAAATGTATGGTTGTAAACATGGCCCCACAGAATGTTGGCCAACAATATAATATTAGTTGTATTTAAAAAAAAAAAAAAAAAAAACTCGAG