miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTTGTACTCCCTCCGTCCGCA
species: Triticum turgidum subsp. durum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|197667131|gb|FL577935.1|FL577935 KL-232 KI7LS Triticum turgidum subsp. durum cDNA, mRNA sequence

CTTGTACTCCCTCCGTCCGCA
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AAATATGAGGGAGGCAGGCCT

EST sequence (targeted fragment marked with yellow):
ACATTTAAGGTAGAACAAGGTTTGCAATAAACATCATTCAATCTTTAGAACAAAGAAGAGGTGCCTCAGTGCATGGATACATGTGTTCCTCTGCTTGCGATTTTGCAGAGGCAATGGGCACTGGGTCTTGCATTTCCACATTGAGGCGGAGTCTTACAACATAAATTTAAATGCAGAGAACAAAGCAGGAACTACAAAGACGGGTTTATGCAAGAGAAAGGAAGGACACTGACACAATATTTTTGAGTAATAATATGTATTCCCTCCATCCGAAAATACTTGTTGGAGAAATGGATGTATCTAGACGTATTTTATTTCTAGATACATCCATTTTTATGCATTTCTACGACAAGTATTTCCGGACGGAGGGAGTATAAAGTTTATCAACGAAAGCTTAGGACAGCTCGAGCAAGAAAAGTAGAAAAGAAGTCATGATACAATCCACCAGGCCAGTCATCGGTCAGCATTTATCTGATAAGTA