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mature miRNA: TGGAGTGGAGTGGACTGGAGT
species: Triticum turgidum subsp. durum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|39728738|gb|AJ611811.1|AJ611811 AJ611811 Triticum turgidum subsp. durum etiolated seedling 20 day Triticum turgidum subsp. du

TGGAGTGGAGTGGACTGGAGT
|||||||||||||| ||. ..
ACCTCACCTCACCTTACTATG

EST sequence (targeted fragment marked with yellow):
GNAATTCGGCACGAGGGCAGNAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTAGGATACCGATCGATCATAGGTGGAACTGACACTGTGACACACACCGTAACAAGGCTCCAGCTAAGCAGACGCAGACGCAGGCCGGCGAGAGTGGCACTGCGTCGCTCGCTGCTGACCGACACTGGGCGTCGACCCGACCCGACAACACTTTTATTTAGCCCACGTCACGCGACCCCGCGCATAGCACTCCCACTCCACACCTAGTAAAAAGTATCATTCCACTCCACTCCACTGGCTGACTCAGCATCACGCCGTGCCACGTAGGAGCACACGGCCGCCGCCGTGGAAGCTGACCCGGCCAGCCTNCTNCTCCGCGCGCGCCGGCGCCTCACACGCTGACGCTGGCCACCGCGGCGGCCGGCTCCTNTGCCGCGGCCGCGGGCGCCTCCTCCGGTGCAGNCGGTCGCCTCCTCG



gi|39728508|gb|AJ611581.1|AJ611581 AJ611581 Triticum turgidum subsp. durum etiolated seedling 20 day Triticum turgidum subsp. du

TGGAGTGGAGTGGACTGGAGT
||||||||||||||||||||
CCCTCACCTCACCTGACCTCA

EST sequence (targeted fragment marked with yellow):
GAATTCGGCACGAGGAAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTAATGAAGCATATCTTGTCGAGAAAAGAAGAAGAAAGAAAAGAAAAAAAGAGCCGCTCGCTCACTGGATGCTGGCCGACACTGGGCGTCGACCCGACAACACTTCTTTTATTTAGCCCACGCCACGCGCCACCCCGCGCAAAGCACCTCACACCTCGTAGTACAAAGCAGTAGCACCCACTCCAGTCCACTCCACTCCCTGGCTGACTCAGCATCACGCCGTGCCACGTAGGAGCACACGGCCGCCGCCGTGGACGCTGACCTAGCCAGCCCCTCCTCCGCGCGCGCCGGCGCCTCACACGCTGACGCTGGCCACCGTGGCGGCCGGNTCCTCTGCCGCGGCAGCGGGTGCCCGCTCCGCTGCAGCCGGTGCTTCCTCGGCGG