| mature miRNA: ATATAGCATCGTGAGCAATCA species: Vigna unguiculata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|190558369|gb|FG941882.1|FG941882 UCRVU09_CCNT9377_g1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vign ATATAGCATCGTGAGCAATCA EST sequence (targeted fragment marked with yellow): TTTTTTTTCTTTTTTTATTGAGTTAACCTAATTAGATTAGAAAGGACAATACATGATGATAATAGTAATAATATAATGGATAAGATTTTTCAATTTGGTAAATCATGAATACTATATAGCATCGTGAGCAATCAGCCTTTTTTCATTATCACAGATTGACTGCTAACGATGTTATATCATCCACAATGAAATTTCTTCCATGTTGTTGCCATGTTTATGTGTTAAAATCCACTTCCATATGCTGGTGCCCAGTAATCAGCTCCATTTTCATTTCCAACATGTTGGGTACAAGACACAGGAACCAAGCACAACCCTCTACTCCTCAAGTCCTTTGCCTTATCTTTTCCATCCTGGTTTGGAGCTCCCTTTCTTTTCAGGCCATTGTCATTCAACAGCTGACCGGGGTCCTCAGGAAATACAGAATTTCTTTCTCCATGTACAGACTGTGGATTCCTCATGTTTTTTGATCCATTGCCCAAGTAAGGAGAACTCAGTGCCTCAATTTGACCCTGAAGGAATCTTATGTATCCAATGGCTTCTAACAAGACAGAAGCTGTGTCAGTCTTTCCGAATGGGGAAACTAGCTGGTGAAGAGCTGTTATTCTATCTCCTAGCTTCTCCTTTCTCACCTTGAGAGGTGGTTGGCTTGAAGATGGTTGACTCTTAGTCTTCTTGTAAACTCCAGCAGTTGCTGTG | |||||||||
gi|190533640|gb|FG918945.1|FG918945 UCRVU09_CCNT3196_b1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vign ATATAGCATCGTGAGCAATCA EST sequence (targeted fragment marked with yellow): CAAATTGAGGCACTGAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGGAAAAGATAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGAAGTGGATTTTAACACATAAACATGGCAACAACATGGAAGAAATTTCATTGTGGATGATATAACATCGTTAGCAGTCAATCTGTGATAATGAAAAAAGGCTGATTGCTCACGATGCTATATAGTATTCATGATTTACCAAATTGAAAAATCTTATCCATTATATTATTACTATTATCATCATGTATTGTCCTTTCTAATCTAATTAGGTTAACTCTTAAAAAAAAAAAAAGAAAAAAAAAAAAA | |||||||||