| mature miRNA: GTGCTCTCTATTCTTCTGTCA species: Vigna unguiculata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|190471367|gb|FG863229.1|FG863229 UCRVU07_CCNP1807_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vign GTGCTCTCTATTCTTCTGTCA EST sequence (targeted fragment marked with yellow): CATATATCTTCATTCATTCTCTCTGAACTTCAAAAGCAACCCTATTTGGAGTTTTCATCTTCATTTGGTTTTCTCTGTCACCTTTTTTTTCTTTCTTTCTCTGATTATTCATTTTCCATGAACAGAGGAGGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCATGAAAGGAAATTGCATCTCGCTCCTTTGTGCTCTCTATTCTTCTGTCATCACCCTTTTGTACCTTCCCTCTCCTACGTTATTATTTCATTGGGATCTTTTCTGTGCTTTGATTACTTGTGAACTGTCATTTGTTCCTTATTTACATCTACTGTGACATATAACAGAAGATACGATCATACGAGGATTGAGGTTGTGGTTTTTTTTTTTTTTTTTTTTTTTCCTCATTATTTGAAC | |||||||||
gi|190473823|gb|FG870988.1|FG870988 UCRVU07_CCNP7051_g1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vign GTGCTCTCTATTCTTCTGTCA EST sequence (targeted fragment marked with yellow): TTTTTTCTTTTTTTTTCAATAAAAATTGAAATCTTCCATCAAAGGAAACAACTCAAGAACTGTTCAAACTGATCTCATGACAAATGAAAGAAAATAGACAACGGCATACAATCCATTTCATCCTCATCAGCACAAACAATTGTGCAAAACCACAACTAGATTGATAGCAACAAAGGACCCTTATTGAAAGCTTCAACAAGTTCAAGCTTTAAGCATTGGAGTACACACAGATAAGGTTTTGAATCCATAAATTTCCCAAAAGATATAACCACTTAGCCACCTACTCCCACAAGAAGGGAAGGGGAAGTGGGTCGTCATTTTCAACCAAACCATCTAACCCCATTTGCAGCATTCCATTGCAATGAAGGTTGGTTGTGTTATCAAGAACCAATACTTGACCACTAGGATTATCTTTTTCCGTTTCTGAGTAGGCATATTCATTCACAGTATCAAAATGCACAGATCCTGATGGAGATTGCATTGGACATGTGATGCTAGATTGCACCATACTCGACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGAAGAGTGCTTTCGGCTGCTCTTT | |||||||||
gi|182650473|gb|FF546456.1|FF546456 MOPDW69TF MOP Vigna unguiculata cDNA 5', mRNA sequence GTGCTCTCTATTCTTCTGTCA EST sequence (targeted fragment marked with yellow): GGGAGGGTTTTATTGGAATCGAAAGGTCTCTGATCGATTCTGATTCGGAAAATGGCTTCTTCGAGTGCAGCCGGTGCTGGATCCACCGACCCCACAGCTGCAAGAAGAAACACCGAGCGACCCAAGTATTCAAAGTTTACCCAGCAAGAACTTCCAGCGTGTAAGCCAATTCTCACGCCACGAACGGTTATTTCTGCATTCTTGCTTGTCAGCATAGTATTCGTTCCTATTGGAGTTGCTTCGCTAATTGCTTCGAGGAAGGTTGTTGAAATTGTTTTTAGGTATGAATCCACGTGCATACCAAATAATGTTACTGACAAGGTAGCATACATTCAGAGTTCTGCAAATAAAGCATGCAACATAACACTACATGTGCACAAGCATATGAAGTCACCTATTCATGTCTACTACCAGCTTGACAACTTTTACCAGAATCATCGCCGATATGTTAAAAGCCGAAGTGATGAGCAATTGAGGAATCATAATGAAGAGAACTCCACAAGTGCGTGTAAGCCTGAAGATACAGCCAATGGAAAGGCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGACACTTACAGTTTCTCCCGGGACAACAGGAATTTGACAGTGAACAAGGAAGGCATCTCTTGGAAGAGTGATAGAGAGCACAAATTTGGAAAAGATGTTTTCCCTAAAAACTTCCAGAATGGTTCTATTAGAGGTGGTGCAATCCTCAATGAATCCGTACCATTGAGTAA | |||||||||
gi|182398477|gb|FF393827.1|FF393827 MOODQ41TF MOO Vigna unguiculata cDNA 5', mRNA sequence GTGCTCTCTATTCTTCTGTCA EST sequence (targeted fragment marked with yellow): GTCTGTCTTTTCTTCTTCAATTCACAGCAAAGTTAGAGAGCGAAAGGGAAAGCAACCGAACACGCTTGTAACTTCCCTAATTACCAATTTCCCATTTTCACTACGAATCTCGAGGGTTTTATTGGAATCGAAAGGTCTCTGATCGATTCTGATTCGGAAAATGGCTTCTTCGAGTGCAGCCGGTGCTGGATCCACCGACCCCACAGCTGCAAGAAGAAACACCAAGCGACCCAAGTATTCAAAGTTTACCCAGCAAGAACTTCCAGCGTGTAAGCCAATTCTCACGCCACGAGCGGTTATTTCTGCATTCTTGCTTGTCAGCATAGTATTCGTTCCTATTGGAGTTGCTTCGCTAATTGCTTCGAGGAAGGTTGTTGAAATTGTTTTTAGGTATGAATCCACGTGCATACCAAATAATGTTACTGACAAGGTAGCATACATTCAGAGTTCTGCAAATAAAGCATGCAACATAACACTACATGTGCACAAGCATATGAAGTCACCTATTCATGTCTACTACCAGCTTGACAACTTTTACCAGAATCATCGCCGATATGTTAAAAGCCGAAGTGATGAGCAATTGAGGGATCATAATGAAGAGAACTCCACAAGTGCGTGTAAGCCTGAAGATACAGCCAATGGAAAGGCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGACACTTACAGTTTCTCCCGGGACAACAGAATTTGACAGTGAACAAAGAAGGCATCTCTTGGAAGAGTGATAGAGAGCACAAT | |||||||||