| mature miRNA: TCGATAAACCTCTGCATCCA species: Vigna unguiculata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|190548594|gb|FG929041.1|FG929041 UCRVU09_CCNT918_g1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna TCGATAAACCTCTGCATCCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGTGCAATATTGTATATAAGAAAAGATATGAGAAAGAAAGATGCGTGGAGGAAGAAAAGAGTCTCCATTACAATAAAAGAAGAAGAAAACAGCAACAACATAGGTGGGTGTGGTGAGTAGGTATTACTTATTTATGGGTGTGAAGGTTTATTGAGTTGGTAGTACATATATATATATATTATGCAATAAGTTTG | |||||||||
gi|190446860|gb|FG838764.1|FG838764 UCRVU05_CCNN3014_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 V TCGATAAACCTCTGCATCCA EST sequence (targeted fragment marked with yellow): ACTAGTTCTAGATCTCTCTATTCTCCTATCCCTCTCTCATTCATTCTGCTGTGGCCTGCCGTAGTGGTACAGTTTGGCATCAAGCTCTATCAATTTGTTCATTTTCTATCGCAATAATTATAGCAGTTATGGTTTCATGTATTGAGCGTGTGTTGATTTTGGGTACTAAATATGGGGTTAAATTTCATAGGGTTTTAGAAAAATTGATCCCGATAGGTGGGAGTTTGCGAACGAAGGATTCCTGAGAGGGCACAGGCAGCTTTTGGCAAACATAAGGAGAAGAAAGCAACCTTCTCAGCCTTCTAGTTCTCAACAAGGGCAAGGTCACTGTGTTGAAGTGGGTCGTTTTGGACTGGATGAAGAGGTTGATCGTTTAAAGCGTGACAAGCAGGTGTTGATGATGGAGCTGGTGAAGCTGAGACAGCAGCAGCAGAATACGAGGTCGTACCTTGAGGAAATGGAGGAGAGGCTACGAGGGACAGAAATTAAGCAGCAGCAGATGATGTCTTTCTTGGCTAGAGCTTTGAAGAACCCCACCTTCATCCAGCAGCTGCTCCAGCAGAAAGAGAAGAGGAAGGAGCTTGAAGAGGCCATGTCAAAGAAGAGGAGAAGACCAATCGAGCAAGGGCCAAGTGGGGTTGGAGAATCAAGC | |||||||||