| mature miRNA: AGGCTCTGATACCAATTGATG species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110380989|gb|EC946296.1|EC946296 WIN0538.C21_E18 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone AGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): TCTCCATAGAAAGATTCATCCCTAGCTAGCTAGGCATATGGCCATGGTTGCAGCTCTTCTTCTTCTCCTTCTTGTTGCTCCGGTGATCTACGCGGAGAACCACACCGTTGGTGGCAGCTCCGGTTGGGACACTGGGGTTGATTACTCCACTTGGGCCTCTGGAGAAACGTTCACCGTCGGCGATTATCTTGTTTTCACTTATGGTTCCACACACTCAGTCGATGAGGTAAGTAAAAGCAGCTATGATAGCTGTGCGACCAGCAACCCCACCAAGAGCTATACCGGCGGGAGTAACACCATCGCCCTAACCACCGCCGGTTCACTGTACTTCCTGTGCCCTACAACCGGTCACTGCAGTCAAGGGATGAAGCTGGCCATCACCGTCGAGGCCAACAGCAGCAGCACCCCTCCGGCCACATCATCTCCGCCGTCTAACTCAAGTTCTCCAAGCCCTTCGCCGTCTCCGACCACTTCGCCGTCATCACCATCACCTAGTGGGGCGACCAGTAAATTTTGTAGCATGAGCCATTTGATGGTCGGACTTGTGCTTGGTTTTGGAATGATGTTTGCATTGGTGGTTTAGGGAAGAGGCAGTGCTGTTGTTATTATTGGGATGATTGTGTGATTTTTACAATTATTGCATGAATTAGTATTAGAGCTTTGTGTAAGGTTTATGATTTATTGAATAATTGGTGGACATAAAATATTTGAGTCAAAAAAA | |||||||||
gi|110397427|gb|EC963163.1|EC963163 WIN0816.C21_I10 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0816_I10 3', m AGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): GCTAGGCATATGGCCATGGTTGCAGCTCTTCTTCTTCTCCTTCTTGTTGCTCCGGTGATCTACGCGGAGAACCACACCGTTGGTGGCAGCTCCGGTTGGGACACTGGGGTTGATTACTCCACTTGGGCCTCTGGAGAAACGTTCACCGTCGGCGATTATCTTGTTTTCACTTATGGTTCCACACACTCAGTCGATGAGGTAAGTAAAAGCAGCTATGATAGCTGTGCGACCAGCAACCCCACCAAGAGCTATACCGGCGGGAGTAACACCATCGCCCTAACCACCGCCGGTTCACTGTACTTCCTGTGCCCTACAACCGGTCACTGCAGTCAAGGGATGAAGCTGGCCATCACCGTCGAGGCCAACAGCAGCAGCACCCCTCCGGCCACATCATCTCCGCCGTCTAACTCAAGTTCTCCAAGCCCTTCGCCGTCTCCGACCACTTCGCCGTCATCACCATCACCTAGTGGGGCGACCAGTAAATTTTGTAGCATGAGCCATTTGATGGTCGGACTTGTGCTTGGTTTTGGAATGATGTTTGCATTGGTGGTTTAGGGAAGAGGCAGTGCTGTTGTTATTATTGGGATGATTGTGTGATTTTTACAATTATTGCATGAATTAGTATTAGAGCTTTGTG | |||||||||
gi|110362419|gb|EC925952.1|EC925952 WIN0210.TB24.1_J13 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA AGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): ATGTGATCCTATGCGTTTTAAATTCTCATCAATTGGTATCAGAGCTTGCATGATTGACATTTGAGCTGCAATTTTGGGTCAATTTTTGGGTTTCCCGTTTCCTGTGGTGGAAGCCATTTTTTTGGAATTTTATTTCTCGTTTGATGTTGATTCTCTGTTTACAAGCCCGATTATTGTTGGAAACTTGTAGAGAATGTTGTTTGGAGCAAAACCCATCAAATTTTGTGATTTTTGGAGCTCATTTGATGATATTTCGAAAATTAGGGCTTGTTTGGTTCTTGCTATTATGCGGTTTTTTGTGCAATTTTTGGGTTTGGATTGAAGAATTGATGTTTTAGGATGGAAATCTATGTTTTTTTGACGAAAAATGCGTGAAATTTTGGGCGGAAAAAAATTTTTTTTTTTTCTTCTCCAGAACCAGGCCGTGCTCAGCTGAGGAGAAGATGAACAGTGACGTGAGACGTCATC | |||||||||
gi|110401237|gb|EC967840.1|EC967840 WIN0826.C21_A19 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0826_A19 3', m AGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): GCTTTTGTTCTCTTTGAAGAACACTCCCGGCCACTCACGCACACACTCCACTTTGGACTGAATTTTGGGGATTAAAGGGAAGAGCTCATTGATCGTTCATCCTCGGAGCATCACGCACCCGGAAAGCAGATTATTGGACATCAAAGGTAGCAGAAATGGCTTCCCAAAGCACGAACCAAGGTAACGGATGAATTTTGCTATTAAATGCATGCTTAATTGTCATCATGTGATCCTATGCGTTTTAAATTCTCATCAATTGGTATCAGAGCTATGCATGATTGACATTTGAGCTGCAATTTTGGGTTAATTTTTGGGTTTCCCGTTTCCTGTGGTGGAAGCCATTTTTTTGGAATTTTATTTCTCGTTTGATGTTGATTCTCTGTTTTCAAGCCCGATTGTTGTTGGAAACTTGTAGAGAATGTTGTTTGGAGCAAAACCCATCAAAATTTGTGATTTTTGGAGCTCATTTGATGATATTTCGAAAATTAGGGCTTGTTTGGTTCTTGCTATTATGCGTTTTTTGTGCAATTTTTGGGTTTGGATTGATGAATTGATGTTTTAGGATGGAAATCTATGTATTTTTGACGAAAAATGCGTGAAATTTTGGGCGGAAAAATTTTTTTTTTTTCTTCTCCAGAACCAGGCCGTGCTCAGCTGGAGGAGAAGATGAACAGTGACGTGATGACGTCATCATGACGTCATAAAAAAAAAAAAAAA | |||||||||