miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATCTCCCTCAAAGGCTTCCAA
species: Vitis vinifera
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|161719941|gb|FC066723.1|FC066723 sT7aVVM016K14053 VVM Vitis vinifera cDNA clone VVM016K14053 5' similar to emb_CAN66770.1 hyp

ATCTCCCTCAAAGGCTTCCAA
||||| ||||||. |||| ||
TAGAGAGAGTTTTGGAAGATT

EST sequence (targeted fragment marked with yellow):
GGAGAGATCTAGATATCATTTGTTGCTTTCTTTGCCTATGTTCTCTGTTTTAGATTGGCAGCTTAGAAGGTTTTGAGAGAGATGGGGAAGACAGGCAAATGGATTAGAAACTTCTTGACAGGGAAGAAAGATAAGGAGAGAGACAGAGAGAAAGACAAGGAAAAGCTTAACTCAATTGCCATTGAGAATCCAAGCACCCCCATTCTTATCCCACCAACAACTCCCAAAGAAAAACGACGATGGAGTTTTCGCAGATCGTCGGCAACATCAGCAGGTCACAAGGACTCAATCTCTATGGACACAATTGCCACTACACCGCCGGCAGGACAGCCAATATTGGATTCTGAAAATGAGCAGAAAAAGCATGCCATGGCAGTGGCTGCAGCTACTGCAGCAGCTGCTGGTGCAGCTGTGGCAGCTGCACAAGCTGCTGCTGCTGTGATCCGACTAACAGCTGCTGCCACCGGGAGAGCAGGAGCAATTGAGGAGGCTGCTGCTGTTAAGATTCAAGCTGCGTTTCGTGCTCATTTGGCAAGAAAAGCACTGTGTGCATTAAAAGGATTAGTGAAGTTGCAGGCACTGGTAAGGGGTAACCTGGTGAGAAAACAGGCCACTGCTACACTCCGGTGCATGCAGGCACTGGTGACAGTTCAGACTAGAGCTCGAGTTCAGAGGATCCGGATGACTGAAGAAACAA



gi|156737781|gb|EV241894.1|EV241894 VV_PEd03b12.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence

ATCTCCCTCAAAGGCTTCCAA
|||||| ||||||| |||||
GAGAGGGTGTTTCCGTAGGTT

EST sequence (targeted fragment marked with yellow):
TTTACAGGACTCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACCAGGCATTTTAACTCATTTTTTCCTGTTGATACTGAAAAGGGATGTGCCAATTTAGCATATCGAAGGCCCCATAATCGTGAGCCAGTGAGCGAATCCTGCAGCCCTGAGGACATGGCAACTGCCAAGAGTTTCTTTACAGGGACTTTGCTACCACAATCTCTTCACAGGGCAACTTCTCTTCCAGTTGATGCTGTAGACTTTTGAAGCCTGCAAGGTTCTCTACGAAGCTTTAACCAAGTTTTCACCACACCGGCAAACTTAATTAACAGGCTGCCTCTCTTTATTGATTGGAGAACTGTAGGTGAGGGGAAATATTATTTGTACTGAGCAATATGAAGCCCTCCAAGCGGGATCACTTGGGTTGAAATGAGTTTCATGTAAATTACCCACTAACTTCAATGTCAACAAGGGCACCCCACAATCCAATATCATCTCCCAAAACAAGGGAGAATCTCTTTATCTTCATTGGATGCCTTTGTGGGAGAGAGGTAACCCATTAAAGAATTGCATATGCCTGTAGTTTACTACAATATGTCAGTAAAGACTGGCTAATAAAAAGTTTTTGAGAGCATTTATCAACTTGTGAGTAGTACCACACTACCACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCCTTTCGCCAGCTGGGCGTAATAGCGAAAGAGGCCCCGCACCGATCGCCCCTTCCCAAAAATTTGCCGCACCCCTGAATGGGCGAATGGGCAAATTTGTTAACCGGTTAAATATTTTTGTTTAAAAATTCCGCGGTTAAAATTTTTGGTTAAAATCCAGCCCCAATTTTTTTTAACCCAAATAGGCCCAAAAATTCGGGCAAAAATCCCCTTTTTAAAATCCCAAAAGGGAATTTCACCCGGAAAAAAGGGGGTTTGAGGGGTTTGTTTCCCCAGC



gi|110428176|gb|EC994640.1|EC994640 WIN1150.C21_O21 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo

ATCTCCCTCAAAGGCTTCCAA
||||||| |||| |||.|| |
TAGAGGGTGTTTACGAGGGGT

EST sequence (targeted fragment marked with yellow):
AACAAGCTGCAAGGGCATTGAACTTGTTTGATGAAAAATGCTCACTAGATTGCCTGGTTGCTTAAGCTATTGTCTCGGTTGATTCTTTGCATATATAAACACTGCTACGAGAGGGTGAATTTTGAAGGGAGCTTGCATGTCATGACATTCCTTTAATTTTCTTGGAGTATTTATTGATTGGTTCTAGTCGAAATTCAGGTCCAAAAACAATTGGTAGACTCATTCAAATTTTGAGATCAATTCGGAGCAGTTCACCTAATGCAGTTTGGTTGGCATATGGAGGAGAACAAGACACATTGTTTACTCTGAAAATGTGCCCTTGAGGCCTAGCTCAAACAGTAAAGAGATGGGGAGCATTTGTGGGAGATTCCAGGTTCAAGTCGCAATGGGGGCAAAATTTACCTATTAAAAAAAAGAAATTGTTTACTCTGAAAATGTGAATCAATCAGATATCAGTGGGGAGACCATCCATGAGATTGCCAAGGAGAAGAAAAGACAATTTTCTTGTCATCAGCTAAATATAGCTGCACCAACCAGGGAGCGCTATCAAAGGCCCTTTTTTTGTCAATCTACTAAAGTAATCTCAACACCCTCATTTGTTAACCAGGTATTTTTCAAACTCAACTTGAGTTCAGATGCTACATTCCCTGTGTTGTATACCAAAGAATTTAACATCGAGAGTTGTCCTCTGGTAAAGATCATAGCATGATTCTGTATGATTTGCTGATAGACTAGATACAAGGCATGATTATGGGCCTATGCCTTGGATAAGTATAAGGAAGTTGAATAATTGTTCCCAATATGTGGTCTTATTCTTTCATATTAATAAATTTCGTTTTATGCAAAAAAAAAAAAAAAAAAAAAA



gi|110430003|gb|EC996523.1|EC996523 WIN118.C21_I19 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clon

ATCTCCCTCAAAGGCTTCCAA
||| ||||||||. ||||||
AAGACGGAGTTTCTAAAGGTT

EST sequence (targeted fragment marked with yellow):
TGGGTTCCCAAAAATGTCAGCAAAAGACATTAGAGCAATCAACAAAGGAATTGGGGTGGATAACATGCATTACCTCAATGACGGGCTGTGGAAGATGGAGCGCCTGGATTGAAGCTGCTGTGGCTGGAGGGACTGCATTCATCGATGATTTGCAGTTTTCCCCGTATTTTTAACCAAACCTTGCCTCATGTTATCCTTTTATTTTTGTTCCAAATATAAAAGCATATTTGCTGCATAGATGGGTTGCTTTGAATGGGCCTATGCAAATTCCAAGTATGTTTTTTTGTTTTTTTTTTAGGGAATTCATTTTGAATTGGGGGGGAAATCAAACAGGTACTGGAGCTAGATTCCCAGTTATTCATGGAAGATTCACATGAGCCCCATGAAAATGAAATGATTTTTTGTATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTTTTGGACAATGGCAGCTCCTCTGCTTTTGATGATACTGTACACCATTTGGTGATACTTCTAAGAGAAGAGAGATAGCTTTTGGAAATCTTTGAGGCAGAAAATGCAGGGTGGTTTTGAAGGTACGGCACTTTCCTATGGCAGGTTTATGATATCACAATGTCCATAAGCTGTAGAAGAGATTTTCAATTGGATATTTCAATCATACAGATGTTACATGAGAGAGTTGAGCTTGCAGATAAATAAACTAAATCAAAGCTCCAAAAAAAAAAAAAAAAAAAA



gi|294965663|gb|GW837262.1|GW837262 Summer_Black_0659 Grape cv. Summer Black flower and fruit Vitis vinifera cDNA, mRNA sequence

ATCTCCCTCAAAGGCTTCCAA
||||| |||||. |||||||
CAGAGGTAGTTTTAGAAGGTT

EST sequence (targeted fragment marked with yellow):
GGGGGCCCCATGAAATTGAATTTGCCACCGCTGGTAGCATTTCCTTCCCTACATTGGCAACAAGCCTTCACTACATTGGCAACAAGCTTCACCCAGTGAAGAATCCCATTTTACACTCCTGAAAAAGGCCCTATTTTCCTCTGCCACTCTCAATCCTCGCAGTAATTGAAAACAAGGAGTGGCTATCAAAAACCCTCTTCTAAACCGGACTGCAAACGGAGACCAAATGAACGACCCAGCCCACCGTGACGAAGATGAGGATCAAGGGGATGTGTTTATCGATGAAAACGACGTTGTTCAGGAAATCACTGTAGACGACGAAGATCTTCCTGACGTAGAAGGCGAAGATGATGATGCAGAAGATTTTGAGGAAGCTGATGATTCCATGCACATTTTCACTGGTCATACTGGTGAACTTTACACAGTTGCATGCAGCCCAATGGATGCAAGATTAGTGGCAACAGGGGGTGGAGATGATAAAGGATTTATTTGGAAGATTTTGATGGAGACTGGGCTTTGAACTTGGAGGTCACA



gi|110384984|gb|EC949459.1|EC949459 WIN0546.C21_L05 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone

ATCTCCCTCAAAGGCTTCCAA
|||||||||||||||| ||
TAGAGGGAGTTTCCGATAGTA

EST sequence (targeted fragment marked with yellow):
GGCAGTTAAGCAGAAGTTGTGTGATGACTTAAGCCAACTGGTTCAAGAAAGCAGTCACACCCAGTTTTCTAGACTGGAGGAACTCAAAAGGCGTCTGGAAGCTTTGAACCCAAGCCGAGCTTCCATCTCTGGCTCTCATGATGGGAAATTATTGCCGCAACCACAGAGTTGCACAGTTCCAGATGCTTCGTCAGCTCCTCTTATAGTGGATCCAGCTGGTGGTGCAGGTGAAAATGTGGCCAATCAAGGAAATGGTGGAAACGTTCCTGCTACAAATGGTCACAATCAACAGCCTAATGTTGAGGGAGAAGGGAGAGGAAAGAAGAAAAGTTTTATCCAAGGGAGGGGAAGGGGAATTGGGGCTGTGCCCAAGGGTAGAGGATCTTCTGCACCTGGCTGGACGGGTGCTGGTTTTGATGTGGATGGTAGAACTTAAGAACATCATTTGAGGTTCCTTGTTTTCCTTGCTGGAGATGGATGATAATCTCAATTTCCCAGAATCATAATATCGCAACAATGGGAGCTGGTTCTTGCTGACAATTTGGCTAGTATCCAGGTAATTCCTGCTAGGAAAAAAATTCTTTTCTTGTGTGAGATTGCAATGAAAATGATAGCCTTTGAGGGAGATGCTGATCAAGTTCCCTTATAGTGAATTGCATTAAAGTGTCAATTCTCTTGACTGAGTAGTGTACTAAGTGTAGAGTAGATGTGTGTTTTTATGACTGAAGCAGTCACTAGATGAAATATTAACTGAGATGTTTGTTTGGGTCAAAAAA



gi|110388963|gb|EC953768.1|EC953768 WIN0559.C21_L12 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone

ATCTCCCTCAAAGGCTTCCAA
|||||| |||||. ||||||
TAGAGGCAGTTTTAGAAGGTG

EST sequence (targeted fragment marked with yellow):
GGCGTAGAGTTGTTTAATTCCAAAAGTCTATCAACATACACAGATCGACAAAATGATATTCAGAAACACAAGCCAAGTGGGTTAGCTGCAAAGTCTTCGACTTGCTCAAGGAACGCAAATTAGCAGGAACTTTGAGACATGATGCTTTGACGACTTCGAGTTCAAAAAAAGACCAGTGAAGATACCAATGCAAATATTTGAATTTCAAACATTTTATTGATATATCGAGCGATGAACACAGTGGAAGATTTTGACGGAGATAGGATATGCTGAAAGATATCATGACAACCACAGGAAGATGGAAGCTAAGCCCAATGACCCGCTCTCCTTTGCTGAAATGGCTTAGTGAAGAACTTGGCAAAGGGAGTCTCAGGAACTGGAATGAGTTTCCCAATGATGGCCAGAGGCCAGCTGACAAGGCCAATTGCCAAAGAAACCATCCATAATTTCC



gi|110689502|gb|EE065782.1|EE065782 C2B03647 Buds/little clusters (VvC2) Vitis vinifera cDNA clone C2B03647, mRNA sequence

ATCTCCCTCAAAGGCTTCCAA
|||||||||||| ||||||
TAGAGGGAGTTTGAGAAGGTG

EST sequence (targeted fragment marked with yellow):
TTGGTTCAGACTCTGCAGGGAAAACATTAACTGTGGAAGAGTTTGAGGGAGATGAAGTGTGCAAGAGATATGTTTTTCTGTGACGCCACTTGGTCCTTTGTGGAGGTGAGTTGGGTGTTGTTGATTGGTTCTCCTATTTTGGATAATTCATGTACAAAAGAAAAAAAAAAGGTTAGATTTTGGTGGGCATGTGGCTTTTTTGTATTGTACATTTCAAATAAAAATGACATATATGAGCTCTCTTCTTTTTGGAAAGTTTCAATTTTGCTTTGTAAATGATAATTCTTCTCGATTCACAAATTTTCCCTGTTTTCAAGCATATCTTATCTTCACAGCATTGCCTAGTAGTTTTCCATTTGAATGATTCACTTATAAATAAGCTTCAATGCAGTTGTGATAGATTATGCTATCAGGAGGAATGAAGAAACTAAATTAAATTTTTTAATGAAGCTGGTTGCTTCTTTTCCTTCACAAACATTTTATCTAAGAAGCTAGAATTAGGAAAGTACAAGCAACACTGTCGAAGTTTGTTCATTTCCAAGCCTTCTATGTATGGTTTAGTGTTTTATAATGGCTATCATCTGGGATAGTACAATACAATTTGTGCTTACTTATCAAAAAAAAAAAAATCATCTGGGATAGTACAAGTTGACCTGTCTTCGTTCCTATTTTTTATTGGGCCCTGTAATTGGTGCCACACCTTCCTGCTGAGTTCCAGCATGGGATAAAACTTGCCTCTCATAGTTCTCTCTGTGTTCCTAAGTTAAGCGCTGCTA



gi|156729026|gb|EV233137.1|EV233137 VV_PEb06c04.b1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence

ATCTCCCTCAAAGGCTTCCAA
|| |||||||||| |.|| ||
TAAAGGGAGTTTCGGGAGTTT

EST sequence (targeted fragment marked with yellow):
AAAATATTCCAGGTATGGCATACGGCCGGGCATTCAACTGGCCTCAATTGCTGACTTTGTGGTCCATTGCGTTTACCTATGTACTCCCCTTCTTCCTCATTCCCCGCACCCTGCATCCACTATTAGGCTGGACCCTCTACTTGGTGGGCTCTTTTGCACTTTCCTCTATAGCAATGAATGCTTTTCTGCTGCCAATGCTTGCCGTGCTAACACCAGGGCTTGGGATATTGGGGGCCCTTTTGGTCATGGCATTCCCTTGGTACCCAGATGGGGTTGTGAGAGCTCTAGTTGTTTTTGCCTATGCCTTTTGCTGTGCACCCATTGCATGGACCTCACTAGTTAAGATCATGACATGTCATCAAGTTTCCCCTGAAAAGGAAGTTTTCTTCCCAAAGTTGGGCGACTCTCAGCCATCTCCTGATCCCATCAAGTTGTGTTGAGGACCAAAGGGCACCCGCAAAATTGATTGTCCCAAAAGAAAATGGGAAATTTTCCTTGGGAAATCATAAGAATTCTTCACATAGTTATTCTTTCGTGGAGAGAAAGGAACTGTTACAGAGAAGTACCAATTTGTATGGCTGCCGGTATTGTTACATGTATTGTACTTATTAAATTCAGAGATGGGCTAAATTCAATTCAATGAGCGGTCCCATAACATTCATTGGAACCAGGTCGTTCTCAAGGCTCTGACCAACTGAGCCGGTACCTTTGGGCTGTTCAAAACTATTCGGAGTCCAAGAGCAGCACCTAACACGCAGAGGCATTTAATGGGTTGAGAGCCCACTTTGAGGGCTTTGAGGGAAATGGAACTGAGGTATGAATCTAATAGAAAGTACAGCCCCAAAAACACCAGTTAAAGTTTATCCGCTGAAAACCAATTCGCCTTTAAATTAAACAAGGGGGAGCTTGGCCCGTACGGCTCTTATTTAAAAAGGAATAAGTCAAACCTGCTATTCCACCCACGGCAATTTCCACATACCTCTTTTCTAATACAACTCTCTTCCGAATTTTCTCTCCTCACTTCAACTATATACCTATCACCTGATAATACCATTTTGTCGCTCCCCTTCCAATCCAACCATAATTCTATCAACTCAAGACAACTTGTAATCTTGGGCGCTCGACAACTTCGACCTCTCTCTCGCCAAATCCCCCCATTCGCTGTGCCCGAACAACAAACCAAGCGGCCCCCCCCTAATAA



gi|156726818|gb|EV230929.1|EV230929 VV_PEa16f06.g1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence

ATCTCCCTCAAAGGCTTCCAA
|||||||||| | |.|||||
CAGAGGGAGTTGCGGGAGGTT

EST sequence (targeted fragment marked with yellow):
GGGGGGTTNNNNNNNAAGAGACCTAATGCGGCCGCAGCATAGCTTGCTCGAGTCTAGAGTCGACTGGGCCGAGGCGGCCGACATGTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAAACAACCCCATTTTTAAATTAAAAAGGGTGGGGGAAATAAAAAAAAACAACCTGCCCATACCAATTTTTGGAACCCCAAAACCCCTAAATTTTCAACCCCAAAAAGGGGAAGGGGGGGGGGGGCCCTTCCCACTAATTTTTTTCCCCCTTTTCAAAAATTCAATAAAAACAACCTACCCAACTTAAACTTTAAAAATCCTACCAAAATCNTCCAAAAAAAAACCCCCTCAAAAAACCCCCTTACCAACCCCTAAAATAACAAAAATTTTAACTTAATCTCCAAAATAACAACCTTCCCTCCGCNGCCCCAAAAAATATAAGGGGGGGGGGGGGGGGGCAACCAAAATTTTTCNTTTTACGCGGTGGGGTCCCCAAAAATTCCCCCTACCCCATTTTACCGAAAAATCTTAAAAATGGAATTCCTTTTTTCCTTTATCATGGGTCCCGGTGTGGACCTCCGGGTTTGCCAGGGGTCCCACCGGAAAATCCTACGCGCGAGAAGAGAAATAAAAACCCCGCTTCCAAGGGCGCATTTGGAGGGCGTTGAGGGAGACGAAAAAGCAAAGCAGCAATTGTGGAGGGCTGGAGGGAGGTGGAGCCCCGGGAGAAGGGCGGAGAAAGGGAGGGGGGNCGGCGGAGGTTGTGTGGGTCCCAGAGAGGGGAGACACCGGGGAAGAGGCGTGGGGGGGGGGAGGTGCGCCCGAGAAGGAGGGGACGAAACGCGCCGGGGGGGTTTGAGGGGAGGGGGTGGACCCAAGGGGAAGGGAGGGCAGAGGGGTGGGGGTGCGGAGGAGAGAGGGAGGAGAGGTGGGGGGGGGGGGAGGGGGAGGGTAGAAGAGGAGAAGAAGGGGGAGGAGGGGGCGAGGAGCGAGCGAGAGGTGGGGGAGGGGNAGCCGGAAGGCGAAGAGAGAGAAGAAAGGGTGGGGGTCGGAGGAGAGAGAGGAGGGGGAGGGGAGGGATGAAAGAGGGGGGAAAGGCGGGGGGAAGAGAGAGGGAGAGGAGGGAGCGGGGAGGGGAAGGGGAGGACGAAGAGAGGGGGAGGCAGCGGAGGAGAGGGGAGGCGGAGGGGAGGGAGGGGGCGAGGGTGAAGGAAAGAGGAAGGAGTAGGGAGAGGGAGGGCATTCAGGGGAACAGGAGAACAAGGTAGGGGAGG



gi|110380936|gb|EC946239.1|EC946239 WIN0538.C21_C05 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone

ATCTCCCTCAAAGGCTTCCAA
|||||||||||| ||||||
TAGAGGGAGTTTGAGAAGGTG

EST sequence (targeted fragment marked with yellow):
TGACGATAACAAGGTGGGTTTGTGGCGGAAGGCGCTATCGGTCGAATAGTCGCCGCTTTGCACGGCCGGTCCCCCGATTGCAGGGCGGTGGCGGCCACTATGTTGACGAGTTTGGCGGTGGTAGAAGTGAACAGGGCCACGATTGGGACATACCCATATGCTATAAGGGCGCTTGTTTCGCTACTTCGAGACGGGAAAGGTAGAGAGAAGAAAGAGGCTGCGACGGCACTATATGCTATCTGTTCGTTCCCGGATAATAGGCGAAGGGCTGTTGAATGTGGGGCGGTACCGATTTTGATCAGAATTGCAGATTCGGGATTGGAGAGGGCAGTTGAAGTTCTGGGCCTTTTGGCAAAGTGCAAGGAAGGAAGAGAAGAGATGGAGAAATTCAATGGTTGCGTAAAGATTTTGGTGCGTGTTTTGAGAAATGGAAGCTCGCGAGGTGTACAGTATGCACTGATGACTCTGAATTCGCTGTGTAGCAATGGGGATGGGATGTGTTTGGAGACGATGAAAGAAGGGGTCTTAGAGATTTGTATGGGCTTGGTAGAGGATGATAATGAGAAGGTTAGGAGAAATGCTTCAAGTTTGGTTCAGACTCTGCAGGGAAAACATTAACTGTGGAAGAGTTTGAGGGAGATGAAGTGTGCAAGAGATATGCTTTTCTGTGACGCCACTTGGTCCTTTGTGGAGGTGAGTTGGGTGTTGTTGATTGGTTCTCCTATTTTGGATAATTCATGTACAAAAGAAAAAAAAAAGGTTAGATTTTGGTGGGCATGTGGCTTTTTTGTATTGTACATTTCAAATAAAAATGACATATATGAGCTCTCTTCTTTTTGGAAAGTTTCAATTTTGCTTTGTA



gi|161721575|gb|FC070105.1|FC070105 sT7aVVM026M10035 VVM Vitis vinifera cDNA clone VVM026M10035 5' similar to emb_CAO47588.1 unn

ATCTCCCTCAAAGGCTTCCAA
| |||||||||| |||.| ||
TTGAGGGAGTTTACGAGGTTT

EST sequence (targeted fragment marked with yellow):
CAATGGCGGCTACTAACCTTCTCCCTCAAGCTCCCACTTTCTCCAAATCCCTAAAATACCCTTTAAACCCAAAGTCATTTTCTCCATTTCGCAACTTACTTCTCAGACCCTCCCCTAAAACCCTGACGCTCAAAGCTGTTCTATCCCAAAACCCTGCAAAAACCTTAACCTCAGACGCACAAGCCCAGAAATTTCAGCATTGTTTCAGAAAATCCGAAGATGGGTTTCTCTACTGCGAAGGTCTCAGAGTCCAAGACGTCATGAACCAAGTAGAGAAAAGGCCATTTTACCTGTATAGTAAACCACAAATTACGCGAAATTTTGAAGCTTACAAGGAGGCTTTGGAGGGTTTAAGATCGATTATTGGGTATGCGATTAAAGCCAACAATAATTTGAAGATTTTGGAGCATTTGAGGGAGTTGGGGTGCGGTGCCGTTTTGGTGAGCGGGAACGAGTTGAGGTTGGCTCTTCGAGCTGGGTTTGATCCAACAAGGTGTATCTTTAATGGGAATGGGAAGCTTTTGGAGGATTTGGTGCTAGCTGCCCAAGAAGGTGTCTTTGTCAATGTTGATAGTGAATTTGATTTGGATAATATTATATCAGCTGCAAGAATTGCTGGCAAGAAGGTCAATGTTTTACT



gi|156724591|gb|EV228702.1|EV228702 VV_PEa017e07.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence

ATCTCCCTCAAAGGCTTCCAA
|| |||||||||| |.|| ||
TAAAGGGAGTTTCGGGAGTTT

EST sequence (targeted fragment marked with yellow):
TGGTGGGGGGGGGGGGGGCAGGGGATCGGCATTCGGCCGGGCTCTTTTGCACTTTCCTCTATAGCAATGAATGCTTTTCTGCTGCCAATGCTTGCCGTGCTAACACCAGGGCTTGGGATATTGGGGGCCCTTTTGGTCATGGCATTCCCTTGGTACCCAGATGGGGTTGTGAGAGCTCTAGTTGTTTTTGCCTATGCCTTTTGCTGTGCACCCATTGCATGGACCTCACTAGTTAAGATGGTGGAGTGGCATCAAGTTTCCCCTGAAAAGGAAGTTTTCTTCCCAAAGTTGGGCGACTCTCAGCCATCTCCTGATCCCATCAAGTTGTGTTGAGGACCAAAGGGCACCCGCAAAATTGATTGTCCCAAAAGAAAATGGGAAATTTTCCTTGGGAAATCATAAGAATTCTTCACATAGTTATTCTTTCGTGGAGAGAAAGGAACTGTTACAGAGAGGGAGGGGAGGGGGGATGGCTGCCGGTATTGTTACATGTATGGGACTTATTAAATTCAGAGATGGGCTAAATTCAATTCAATGAGCGGTCCCATAACATTCATTGGAACCAGGTCGTTCTCAAGGCTCTGACCAACTGAGCCGGTACCTTTGGGCTGTTCAAAACTATTCGGAGTCCAAGAGCAGCACCTAACACGCAGAGGCATTTAATGGGTTGAGAGCCCACTTTGAGGGCTTTGAGGGAAATGGAACTGAGGTATGAATCTATAGAAAGTACGGCCGAAAGACAGCAGTATAAGTTAGTCGTTGAAAACAATTGCATTGAATTAAAGAGGTGAGTTTGTTTGTTTGTTTTTTTTAAATAATACGTTGAACTTGTATCTTCACAGGGAATTTCAGTACTTTTTTTTATAAAATTATTTCCCACTTTTTCTTCTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTGTCGGCCGCCTTCGGCCCAATCTATTTCTAAACTCAAACAAAGTTTATTCCTTGGGGGCCCGCAAATTCAGAGTTCCCTTGGGCCAATTTCCCCCTTATAAGTGAGGTCCTAATTTAAATTTTCCCTGGGGCGGGCCGTTTTTAACAAATTCCCTGAATTTGAGGAAAAAACCCCTTGGCTTACCCCAATTTTTTTTCCCCCTTTTGAAGAAACTTCCCCCCTTTTCCCCCGGCTTGGGCTTAAAATAAGAAAAAAAGCCCCCCCGCCCTCATCCCCCCCCTTTTCCCAAACGTTTGTGCGCCCGGCCGTTTAGAATAGGGGCAGAT