| mature miRNA: GCATAGCATCATGAGCAATCA species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110424290|gb|EC990646.1|EC990646 WIN1140.C21_C22 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo GCATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): AAATTAATAGAGACAAATTTCAGCAATTATTCTGCATGGCACAATCGTAGTAAAATTGGAAAGCTTACTCTTGCAAGACTGCTGATGGCTCATGATGCAATGGTGTCATACATGGCTCCACATTCTCACAAGAAGGTCCATTCTGAAGAAGTTCTACAACTATATAGTGACCTAATGGAGTTGGACCCAATGCATTCCCAATACTATAAGGAGGCACAAAGCTTAGTCTTATTGCAGCAGGTGACATCCAATAGGGAATCCTTGCTGAAACACTGCTGCCACCATAGGGTCTCGACCTCTTCAAGTGTTGGTAATTCTGTCTGTTTACGACTAAATAATTTGTCTTTATCAAGGATCGGATGTGTTGAGCAATTATTGTGGGTCCAAATGCTTGACCTCAGCCACAATGAACTTCGATCAATTGATGGATTGGAGGCTATGCAGCTTCTCTCTTTCCTGAACCTGAGTCATAATAAGCTTAGCAGTTTTACTGCTTTGGAGCCTTTGAGACTGCTGAAGTTATTAAAGGTGTTGGACATCTCATACAATGAGATAGGTGCCCACCCCGTTGACACAAGAAGGTATTTGTGCTCTTCTCCTTTGTCTCATACGGTAGGAAGTGATTGGAATTTCAATGAATTTGTACCTGACGATGCCAAAGTGACAAACTACTGGGAGGCTTTTGCGATTTTTAGAGGCTTCAATTTGACGCAATTGGATATTGTGGGGAATGCAATCACTGATGAAAAATTCAAGTCATTTCTGATTAAGGTTCTCCCTACACTAAAGTGGGTAGATGGTGAAGAATTGCATTAACCTTCAAATAATTTTTTTCTCCTTTATTTACATATCTCTCTCTGTTTCTCAATACAGTTAGGCATACCATGTTTCTGCTGTTATCATAACCACTAAATTTATTGAAGAACCTTTTGCTTGTTAAAG | |||||||||
gi|110697609|gb|EE074749.1|EE074749 C4B06714 Berries veraison stage (VvC4) Vitis vinifera cDNA clone C4B06714, mRNA sequence GCATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GCAGCAACCGTCTTCAGTTCAAGGGGAGAGGAATTGTATATTTCCTGAAGACCCTGGCCAGCTGTTGAATGATAACGGCATGAAGAGGAAAGGAGCTTCCGACCAGGAATCTCATGAAGAACCAAAGAAAGACCTGAGAAGTAGAGGGTTGTGTCTGGTGCCTGTTTCATGCACACTGCAAGTTGGGAGCGACAATGGAGCAGATTATTGGGCTCCGGCTCTGGGCGGTGGCTTTCGATGAGCCGATTCCATTTTGGATGCAGCACATTGGAGCTAATTGAAATGATATAATATCATGAGCAGTCACTCTGCTAAAATCTAAGGCTGATTGCTCATGATGCTATGCATTCTTGATTGGATTTATGTGTGCTGTAGCTGGGACTTTGGAAGTCCTTAAAAAAAAGTACTCCTTCTAATTTAAGATCAGCTGATCATCATCTATCTTCTTTTCTATCTTCTGCTACAATGCTTTCATGTATATGCATTTCCAGTATGATTAATCATTTTCAGTTGCTGCTTANGGAGCAGCATTCCTTTCTCTT | |||||||||
gi|110428890|gb|EC995374.1|EC995374 WIN1155.C21_B07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo GCATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GCTGAACGACAACTGCCTCAAAAGAAAAGGATCAGCACCTAATCAGCAGGATACACAAGATGCACCAAAGGACTTGAAGAGTAGAGGGTTGTGCCTGGTTCCGGTTTCGTGCACTCAGCAGGTTGGAAGTGACAATGGAGCCGATTATTGGTCTCCGGCTCTCGGTGGAGGGTTTTGATCCGCGGTACATGTGTGGCTGTGTAGCATGCTCAAGCTTTCATGGAATGAGATAATATCATGAGCAGTCACTCTGCTAATTTCTAAGGGTGATTGCTCATGATGCTATGCATTCTAGACAGGAAGCCAGTGTGCTATATTTTATTGATGACCTCTTTCACATACAGTTGCTGTACTCTATATATACAATTTTAAGATTTAAGCTATCATACAGAGCTTCATGTGTGTGAAGTTCAATCACTATTTTATGCTGATCAAAAAAAAA | |||||||||
gi|110692367|gb|EE071533.1|EE071533 C3B07749 Clusters 4 cm (VvC3) Vitis vinifera cDNA clone C3B07749, mRNA sequence GCATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): TCTAGGGTTTGGTCGAGAATGGCGGAAACTGATATGAAAGAGGTGTTGAAACCCTTCCACCAAAGAGCTTCTGAAGCTGAGGACCGCTTGTCAAAACTTGAAGCTGCTCTTTCCAGTACGAAAGATTCTGGAAATGAGGAACTTTTGAAGATGATTAGTGACCTTCAATCAAAGCTACAACATGCAGAAGCTGAACAAATTTCAGAACGGGAAAAGGCTCAGAAAGATATTCAAAAGCTTACAGTGGAAAATGCTAAACTCCAGTATCGTGTAACCCATCTTGTCCGGGCATTGAAGGAGGCTGACTGCAAGTTGGAGGCCAAGTGAAGTATGATGGTTTACTTAACAACTGCTTTTTATAGGGCAATTGTTGAAATCTCACGTGACAAAGTTAGTAGAATTTGATAATTATGATCACCCCAAAATTAGGCTTCTTCCATTCTATGTATCACATTAAATAATTAAACCTCTGAAGACAATTTTTAACATGAAATGAGGTCTGCCAGGAAAGACAAAGCTGGGTCTTGTGAGCTATGCAAGAACAGCTCAGTGTCATGGTCAAATATGCCAGGCAAAAATCTAGGTCTTATTGACTGAGATTCTTAGTGGTTGTCATGATGCTAAGCTGATCAGCTATTTCTGATTATTTTCAAGT | |||||||||