| mature miRNA: GCCTGGCTCCCTGAATGCCAT species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|156730947|gb|EV235068.1|EV235068 VV_PEb18a06.g1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence GCCTGGCTCCCTGAATGCCAT EST sequence (targeted fragment marked with yellow): AAGAGTAGGNNNGCCAATACTGTATAGGCCCATGCTAGCTTGCTCGAGTCTAGAGTCGACTGGGCCGAGGCGGCCTACATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATATTTTAATTCCCAAAAGCTAAAAGAAAAAGAACATATGTACTTTGAAGAATAAATTGGAAAATGAATGGTCACAGTTCTTTGGGATTTTTAAGACTACTGATTGTTGCTACACCTTTAGTTTATTTGAGAAGGCAAAATGGATAAGGTGTTTGGCTGTATGATAAGAACAGAGGAAAGAAAATTACAGATTTTGATCAGTTGGAAGAGGTGATGCCTCCATGGAAATGAGCTTGACATCATGATCACCATGTGTTTCGCCTGCTTGACTCCCCTCATGCCAAATAGGAAGGTTGTCAACACTCTTTAACAAGCTTCTTAGATGGCATTCAGGGAGCCAGGCAAAACAATATTCCGAGACGAAATCATAGAAGTCAGTCAGCCTCAAGCTCCATCTCAGTTCGAAAGTAGCACAGGTAATTTGCTAGAGGAAACCCAGGGGAACTGCTTGTGCAGGGGATCTGTATCTCTCAATCCCAGTAGTCTTCTTATTCTTTATGTCTATATATCAATTTCAGCTTTCTAGGACTCTCTCTTTCTCACTCCTTCAAAGTTCAGAGCAACAAGCAATGAGGAGTTGGATTTAAGGAGTTGTTAAAATAGGAAAAGTAGAGGAGCCCAAGACAGAAGAAACTCCATGGAAGGAGAAAGACAGGACATGGAGAAGGCGGCAGGAAAGGCTTCTTTCTTACAAATAGTTCCATAGATAGAGCCAAAGTGCCTGGGTTTTGCAGGTAGGCAACTTTGGTTTATCTGTCATTGGAAAAGGCCCCCCGGCCGTATGGCCGAATTCCCGGGTACCAAACACATGGCGCGCTTCCCGAGAAAAAAAAAAAAGCTCGTCCAGATCTCGGAGCTTGGCGTAATCATGGTCATAGCTGGTTTCCTGTGGGAAAATTGTTGGTCCGCTCACAATTTGCTAGAGTAC | |||||||||