| mature miRNA: TAGCCAAGGATGACTTGCCTA species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110362334|gb|EC925861.1|EC925861 WIN0210.TB24.1_E09 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA TAGCCAAGGATGACTTGCCTA EST sequence (targeted fragment marked with yellow): AAGGCTGAGCTGAAAAGAAAGCTATCAAAGTTAGAAAGCCATATCTTCATGAATCTCGGCACCAACATGCAATGAGAAGGGCAAGGGGTTGTGGAGGCCGTTTTCTCAACACTAAGAAGCTTGATAACAATGATGCCAATACAACAGCAGAAAAAGGTTCAGTCTCTGGTGCGGCCCTTTCTACACAATCTGCCAGTTCATCAGGCTCCGAACACCTGCCTACCAACTCTAGTCGAAATTTGGATTCCTCCAGTGTGCAGCAAGAAGAGAAAGGACGCACAATTCAAGATATGCTTGAAGCACACACTTACTCCAATGGCAACAGGAATGGCCATGGTCTATCATCAGCATACCATTCATCAAATGGCAGTGAGGGAGGTGACTGCTTTGGCCAACCAAGGGAAAACATGCAGCTGAACACGGCCCCTCATAGGGCTCTACCCATCAAATAAAAACCTATCGGTTAGGTGAAGCTGGAGGTGCAGTATCCACTTTGAGGACGGAAACCCTCATGGTTACATGGCATTTCCCAGGCAATTCATTCTTGGCTTTGGTTACATGGCGTTTCTGGGGTGATACTAGGGATGGAGATACATGGTTTGGCCTTTGCTGTCTCCATTCTAACCCTACCTCCATCTCTACTATTCACCCCTTCTGTATAAAAAGGCAAAAACCCGAAATCGTGGGATTAACAAGTAGAGATAGTGTGAATTTGGAGATTCTAAACAGTTAAAACATCTGAAGGTTTCCAATGTGTGATGACCTTTGTGTGAAACAGAACGTTTGCCTTTGCTTCTCCAATTGTGTTTCATGTTAACTATCTTAATTAATTGTTGT | |||||||||
gi|110383364|gb|EC947732.1|EC947732 WIN0542.C21_I13 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone TAGCCAAGGATGACTTGCCTA EST sequence (targeted fragment marked with yellow): AGCACCTACCAGAGTCCCACTGCCCTTTGATATTGCAGAGGATGGACCTATTTTTGTCAATGCAAAACAGTATCATGGAATTCTCAGGAGGAGGCAGTCACGAGCAAAGATGGAGGCCCAGAACAAACTTGTCAAAGCCCGAAAGCCATATCTGCACGAGTCTCGGCATCTTCATGCCCTAAATAGGGTTAGAGGATCTGGTGGACGCTTCCTCAGCACGAAAAAGCTCCAAGAACCGGACTCAACTTCCAATGCTGGCTGTCATAGTGTATCTGGCTCTGGTCATTTTCACCAGAAGGGAGACACAACTGAGTATGAAGTCCATCAGTCTGATACTGGCAAATTTGTTGCTTCAACTACATCCAGCTCTGATGTCACCAGTGTCTCTAACAGTGATGTCCTTTTCAGGCAGCCGGAGCACAGGTTCTCAGGCATGTCTCCCCACATGGGTGGAGCCATGCAAGGTGGTGGCGGTGGGACTTATGGGCAATGGAGTCCTGCTCCTGGTTGTCCGGTGAGAAGTCGATAGGAACAAGATCGATGGAGTCACTGGTCTGGGCAATTCATCCTTGGCTTTGTTACTTTCGTTTCATGCGTGTTAAGAAGATAAACACATCAAACTTCATGGTGTAGTAGAAATACTCTGCCTTTCCCATTTCCAACTGCATACATTCTGGCTCTGTAAACATGGTTGAGAAGAGGCTATGCTTGAAACTCTCTGTTTGTGAACCATTGTTTTGTTTCTTCAAGACAATGTGAGATATTGGTTCACCGGTATTTTGTTTGTTGCTTACAGAAAGCAAACCCTGCCTTTTGTGCTAGTGTAGTGATGTTGATGCCAGTTTTTC | |||||||||
gi|110403058|gb|EC964155.1|EC964155 WIN087.C21_G15 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN087_G15 3', mRN TAGCCAAGGATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TCACAAGTTGATTGCAACCAATTGACTGCTCGCATTCCAATCACTGCCACCGAGATATACCATTGCGACTTACTAGCACCTGCTTATGGTACAAAGGCTATGATTCATCATCCTCAAATGATGGGAATGGCCCCTTCTCGAGTGCCATTGCCTGTACTAAATCCACAAGAAGAGGTTATTTTCATCAATCCAAAGCAGTATAATGGAATTATGAGGCGGAGGAAGCATCGCGCCAAGCTTGAAGCTCAAACCAACCCTGTCAAAGCTAGAAAGCCTTATCTCCATGAGTCTAGGCATCTCCATGCCTTGAAGAGGCCTCGTGGAGCTGGTGGACGCTTCCTCAACATGTCCAAGCTCCAAGAACCCAAGCCTTCTTCTCCCTCAACAGATGCTCTGATTGCAGGCTCAGCTCAGCCACCTTTCAATGGAAATACTGCATCAGAGTCTGAAGTTCATCAGCCAGAAAACAACAGAGAAGGGGCTTCCACCACCTCCTGCTCTGATGTCACTAGCGGCTCAAACAGTGATGACGTCTTTCTGCAGCCAGAATTCAGGTTCTCCACCTACCCTCCTCACATTGGCGGATCCATGAAAAGGAATGATTCTGGGAGCAATAACTTAGGTGGGTCTGGCCTCGGGTGACAGACGAGGCAGACAGTGGATGTGTCAGCAGCTTGTGTTCATCGTCCATCGAACGATCCGGCTGCTGGTGTCCCTTGGAAAGTCATCCTTGGCTGTGTTTTCTTCATTAGTTCATAGCTTTGTCAGCTGAATACAAGATACGGAGATTGTTACTAGCTGTTATTTCACTTTTTTTTTCCATTTTGTTTCTCTTCGGAAATACAAAAGTAG | |||||||||
gi|110360638|gb|EC923903.1|EC923903 WIN023.C21_C02 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clo TAGCCAAGGATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GAGCTTGAAAAGAAAGCTATCAAAGTTAGAAAGCCATATCTTCATGAATCTCGGCACCAACATGCAATGAGAAGGGCAAGGGGTTGTGGAGGCCGTTTTCTCAACACTAAGAAGCTTGATAACAATGATGCCAATACAACAGCAGAAAAAGGTTCAGTCTCTGGTGCGGCCCTTTCTACACAATCTGCCAGTTCATCAGGCTCCGAACACCTGCCTACCAACTCTAGTCGAAATTTGGATTCCTCCAGTTTGCAGCAAGAAGAGAAAGGACGCACAATTCAAGATATGCTTGAAGCACACACTTACTCCAATAGCAACAGGAATGGCCATGGTCTATCATCAGCATACCATTCATCAAATGGCAGTGAGGGAGGTGACTGCTTTGGCCAACCAAGGGAAAACATGCAGCTGAACACGGCCCCTCATAGGGCTCTACCCATCAAATAAAGACCTATCGGTTAGGTGAAGCTGGAGGTGCAGTATCCACTTTGAGGAAGGAAACCCTCATGGTTACATGGCATTTCCCAGGCAATTCATTCTTGGCTTTGGTTACATGGCGTTTCTGGGGTGATACTAGGGATGGACATACATGGTTTGGCCTTTGCTGTCTCCATTCTAACCCTACCTCCATCTCTACTATTCACCCCTTCTGTATAAAAAGGAAAAAACCCAAAATCGTGGGATTAACAAGTAGAGATAGTGTGAATTTGGAGATTCTAAACAGTTAAAACATCTGAAGGTTTCCAATGTGTGATGACCTTTGTGTGAAACAGAACGTTTGCCTTTGCTTCTCCAACTGTGTTTCATGTTAACAATCTTAATTAATTTGTTTGTCTTTAAAAAAAAAAAAAAA | |||||||||