| mature miRNA: TCAGGGCAGCAGCATACTACT species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110412606|gb|EC978360.1|EC978360 WIN107.C21_I17 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA TCAGGGCAGCAGCATACTACT EST sequence (targeted fragment marked with yellow): GACAAAATCTGTTTATTGATATTGGTACAAGGGACTTGAAGATTTGCAGAAACTTATGCAATCAATACAAAGAACAAAGGGCAAATGAATTAATACTTGGAACACACAGTAAGCAATACTAAAAAGAACACTAGTACATACCACCACTGTCTTTAAAGATGATCTCAACAGAGGATTTCTGGGGAGAATCCATGAACCCACCTCGGTTTGTGTAAGATCAGATTCAGGAAATGAAATCAGAAGCCATGGCTGCTCGGATCCTTAACGATGGTCACAGGGCAAGTTGCATGGACCATCACATAGTTGGTCACACTCCCCAGAAATGTCCTTTGGATGGTGCCAAGGCCTCTGCTCCCCATGACCAAGGAATCAAGCTTCAACTCTGCAACTGCATCACAAAGCTTGTCTCTTGCATCACCCCAGTAAATCTTTGCTATAATCTTCGCCTTTTTCTGGCTAGAAGCAGTGGCAAGCATACCCAAGAACTCAGGATCAAGGTTGATCTCATACTTCTGGGCCACATCCAGATCACGAAACTCCTCTAATGGAATCAAAGGTGAACCAGTGGCCGACCAGAGCAGGTTGCGAGACTCGTCTCCTTGGGAAGGCTTGACGTGGATGAAGAAGAGTGTGTCCCCCTTGTCTAGTAGATTATCTATAGCCCATTTCAGAGCTATGTTGCTGCCCTGAGAGAAGTCCACTGCCACCCCTATCTTCCTATCTTTTGCCATACTCTTTGAGAGAACTAG | |||||||||
gi|110387914|gb|EC952621.1|EC952621 WIN0556.C21_E10 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone TCAGGGCAGCAGCATACTACT EST sequence (targeted fragment marked with yellow): CTCGTGCCGAATTCGGCACGGGGAGTTTGTGACATCATAAAACTACAAAATCTGTTTATTGATATTGGTACAAGGGACTTGAAGATTTGCAGAAACTTATGCAATCAATACAAAGAACAAAGGGCAAATGAATTAATACTTGGAACACACAGTAAGCAATACTAAAAAGAACACTAGTACATACCACCACTGTCTTTGAAGATGATCTCAACAGAGGATTTCTGGGGAGAATCCATGAACCCACCTCGGTTTGTGTAAGATCAGATTCAGGAAATGAAATCAGAAGCCATGGCTGCTCGGATCCTTAACGATGGTCACAGGGCAAGTTGCATGGACCATCACATAGTTGGTCACACTCCCCAGAAATGTCCTTTGGATGGTGCCAAGGCCTCTGCTCCCCATGACCAAGGAATCAAGCTTCAACTCTGCAACTGCATCACAAAGCTTGTCTCTTGCATCACCCCAGTAAATCTTTGCTATTATCTTCGCCTTTTTCTGGCTAGAAGCAGTGGCAAGCATACCCAAGAACTCAGGATCAAGGTTGATCTCATACTTCTGGGCCACATCCAGATCACGAAACTCCTCTAATGGAATCAAAGGTGAACCAGTGGCCGACCAGAGCAGGTTGCGAGACTCGTCTCCTTGGGAAGGCTTGACGTGGATGAAGAAGAGTGTGTCCCCCTTGTCAAGTAGATTATCTATGGCCCATTTCAGAGCTATGTTGCTGCCTTGAGAGAAGTCCACTGCCACCCCTATCTTCCTATCTTTTGCCATACTCTTTTCCTCTCTTCAGCTAAATGAAGTATAGAGAA | |||||||||
gi|110708972|gb|EE084026.1|EE084026 S5B01010 Fruits 7-9 mm treated with GA3 (VvS5) Vitis vinifera cDNA clone S5B01010, mRNA sequ TCAGGGCAGCAGCATACTACT EST sequence (targeted fragment marked with yellow): CAGAGAGCTGAAGCCCCAGGGCGAAGATGTCGGTGCTGTGGGAGAAGAGCGAGACATGGAGATGGATTGTGAGGAAGTCGAGAGACTCCAAGCCATTTTTCTTGGCCTTCGCCACCATATGCGGAGTAGTGCCTGGTGTGATTGGATACTGCGTCATGCAATTCACCAACTCCCGCAATCCAGAGCTCGAAGCCCAACTCCGCAGCAATGCTCGCCCCGATTCCCTCATGATGGGGAAAGTAAATCAAGAGAGGCTGGCAGAATTTCTTGGGGAACTGCAGCGTAAAGAGGATACAAATGACCGGTATGTTGCTGCTCTGAGAGGAGAGACATTGACCAGAAAGCCCTATGAAAGGATCCAACCAATCCCAAAGCAAAGCAACATGGAAGCTAAGGAGCAGAAGAAGTAGATAAGTGGTCGGATCAACCAGTGATGAATACTCCCTGTGCAAATCTGTATCCTTTGACAGGAGAAAGGACTAAGAGAGGTTTCCCTCTTTTCTTATTCGATGCAATCAATATCCACAGGAAATTGTGGTTTTGACTACTTTGGAACTAGTATTTGTGTGTTTCAGGCATCATCAAAGACATGAACTTTGTTTCATTTTAGAATTCCTTCTTGTTCTTGTTCT | |||||||||