| mature miRNA: TCGCTTGGTGCAGGTCGGGAA species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|229418703|gb|GO652940.1|GO652940 Fw2-G7 cDNA SSH library of leaves from two-month-old Vitis vinifera seedlings Vitis vinifera TCGCTTGGTGCAGGTCGGGAA EST sequence (targeted fragment marked with yellow): ATTTTATAGAGGAACCCGAATCCAAGGAGCTTTCAAGCCCGGCCGGGTTCAAGCCTGATCGGACCCATCATCCCTTCCGGTCTATAAAATCACAGACGCTGGATCCATCCGCAGCCACCACAGAGAGAAGGAAGAAGAGAGAAGACAGAGTGAGAAAATGCCTGTGGTGGAGAAATTGAAGATGTTAATTGTGCAGGAACCGGTCGTGGCAGCTTCGTGCTTCATCGCCGGCGTTGGCCTCTTTCTGCCTGCTGTCGTGAGGCCCATATTGGACTCCCTTGAAACATCCAAGCAAGTTCCTCAACCTGCACTAAGTGATGTTGTTGCAGGCATGACTGGTAAAAAACAAGGGTAATATGGATTGTTGCTGTGAGTGATGATCTTCTTTTGTCCTCCTTCGT | |||||||||
gi|110711404|gb|EE087845.1|EE087845 S6B01686 Fruits 7-9 mm (VvS6) Vitis vinifera cDNA clone S6B01686, mRNA sequence TCGCTTGGTGCAGGTCGGGAA EST sequence (targeted fragment marked with yellow): GGAGAAGAAAGAAGAGAGAAGACAGTGTGAGAAAATGCCTGTGGTGGAGAAATTGAAGATGCTAATTGTGCAGGAACCGGTGGTGGCAGCTTCGTGCTTCATCGCTGGCGTTGGCCTCTTCCTGCCTGCTGTCGTGAGGCCTATATTGGACTCCCTTGAAACATCCAAGCAAGTTCCTCAACCTGCACTAAGTGATGTTGTTGCAAGCATGACTGGTATAAAACAAGGGTAATATGGATTGTTGCTGTGGGTGATGATCTTCTTTTGGCCTCCTTCGGGACAACAAGAAAAACCTATGAAATTCACTTCTATCTCGCTTAAAAAATTACTACGCTCACAACTCAACCGACACCACGCTAACCATACTATGACGAAACTAGCCGCCAAAGCACGGACTCTTATATTATAATAAAGAAATACCACAAATGTAAAAATATAATCATTTATCATAGCGCAGGGTCCCCTCGCCGACGGGGACTGTCGGCATGCTAAAAAGAAAATCAACCCTTGCGCTGAGGACGAGGTGTTGTCGACGAGGGCATCCTTCATCTACACCCTTCTGTCTGGAGTATCAAGAAACAGAGGAAAAGGCCTAAAACGACACAAATAATAAATCAATTACTACACAAACAACCCCTCCCTCGCTGTAGGTCTGTATAAGAGGAAACACCCCAGAGCATAAAACACCCATTTCATTCATACATATTTATAGTATTATCACACTTTTTAT | |||||||||
gi|110702967|gb|EE079411.1|EE079411 S2B23582 Buds (VvS2) Vitis vinifera cDNA clone S2B23582, mRNA sequence TCGCTTGGTGCAGGTCGGGAA EST sequence (targeted fragment marked with yellow): TCCCCGACGATTTTAACCAAGAGAGAAGACAGTGTGAGAAAATGCCTGTGGTGGAGAAATTGAAGATGCTAATTGTGCAAGAACCGGTGGTGGCAGCTTCGTGCTTCATCGCTGGCGTTGGCCTCTTCCTGCCTGCTGTCGTGAGGCCTATATTGGACTCCCTTGAAACATCCAAGCAAGTTCCTCAACCTGCACTAAGTGATGTTGTTGCATGCATGACTGGTAAAAAACAAAGGTAATATGGATTGTTGCTGTGGGTGATGATCTTCTTTTGTCCTCCTTCGTACCATCTACAAATACTCTTTTAGATTTCATTTCATCAGCAATGGAATAAGTATGAGACTCATATTTTTTGTGGATAACTAGATGCTGAAACCTTTCATTTCCTCCATAATTATCAATTGATGAACTTACCTCACTAATTCAATAC | |||||||||
gi|110714713|gb|EE091938.1|EE091938 S7B01631 Berries 14mm with GA3 (VvS7) Vitis vinifera cDNA clone S7B01631, mRNA sequence TCGCTTGGTGCAGGTCGGGAA EST sequence (targeted fragment marked with yellow): ATCACGTGGGAATATCATAGTTGGTTCTTTTTTAATTGAAGATGCTAATTGTGCAAGAACCGGTGGTGGCAGCTTCGTGCTTCATCGCTGGCGTTGGCCTCTTCCTGCCTGCTGTCGTGAGGCCTATATTGGACTCCCTTGAAACATCCAAGCAAGTTCCTCGACCTGCACTAAGTGATGTTGTTGCATGCATGACTGGTAAAAAACAAGGGTAATATGGATTGTTGCTGTGGGTGATGATCTTCTTTTGTCCTCCTTCGTACCATCTACAAATACTCTTTTATATTTCATTTCATCAGCAATGGAATAAGTATGAGACTCATATTTTTTGTGGAGAACTAGATGCTGAGACCTTTCATTTCCTCCAGAATTATCAATTGAAGATCTTACCTCACCCCTTTTTAGAAAAAAGAGAGAAAACCCCCCTTTGGGTGTACGAGGGGGGGGGTAGAATAAAGCTTTGAATATCAAATTGGTACCACCAACAGGTCAGTATACATACATAAATAACACTCAAATGAAGAAAGGGTTAAAGAGTAAAAAAATAGAGAAACAATCAAAGGACCTCCGGGTATAACTGGGAAACCCATGGGGCGATTTTTTCAAAAATATGGTTAAATGACGTGGTCCATATAAAATAGTTATTCTAAAAGCTTTTAATATCACGGAGCGTGCTGTCTAATAATACCGTTCACTCCGTACTAACAAGGAAATACCTAGCTGGTTATGTTAAAGATTGTATTTTACAGATGAAGATACAGAAATCCCCAAGGAT | |||||||||