| mature miRNA: TCTTGCTCAAATGAGTATTCCA species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110731963|gb|EE106832.1|EE106832 SCB03412 Inflorescence with GA3 (VvS12) Vitis vinifera cDNA clone SCB03412, mRNA sequence TCTTGCTCAAATGAGTATTCCA EST sequence (targeted fragment marked with yellow): CTTTTATGAGTTTTATCTCTTGGATCAAACTGTGGCCGCTGGTGTATGCCTCTGGCTGATTGCTAGTCTCATTTACAAAATCGAAATCAGTCAAACCCTACCTTTGACGGCGAGGCATCGCACAACTGTTAAATTTATCGCTCCCCAAACACTCCCAGAGAAAACCCTAGAAATCCCGACAGAGCCGCAATCCCCAATCCATGGCGACGAACACGCCCAATTTGGAGTGCCGCATGTACGAAGCCAAGTACCCAGAAGTGGACATGGCGGTGATGATTCAGGTCAATAACATTGCCGACATGGGCGCGTACGTTTCGCTGCTCGAGTACAACAACATCGAGGGTATGATCCTCTTCTCCGAGCTCTCTCGACGTCGGATTCGAAGCGTGAGTAGCCTGATCAAGGTGGGACGCATCGAGCCTGTGATGGTCCTTAGGGTTGATAAGGAAAAAGGGTATATTGATTTGAGCAAGAGGAGGGTTTCAGAGGAGGATATTCANGCGTGCGAGGAGAGGTACAATAAGAGCAAGCTTGTTCACTCGATTATGCGGCATGTTGCCGAGACGATGCAGCTTGATTTGGAGGATTTATACATCCACGTCGGATGGCCTTTATACGAAAATATGGTCATGCTTTTGAAGCATTTAAGATAATTGTGACTGAATCTGATTCCGTTCTGAATTCCCTCACTCGTGAAATTAAAAGAAGTTGGCCCTGAATGGACAGGAGGTGACAAAAGTGGGTCCCTGCTATATCTTGAAGAATTGAAGGATGCTTTGGTTAAG | |||||||||
gi|110426970|gb|EC993399.1|EC993399 WIN1148.C21_E14 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TCTTGCTCAAATGAGTATTCCA EST sequence (targeted fragment marked with yellow): ATACCAGCAACCTAAACTAGTGGTCAACTATCTTCAGACTCTGAAATCCTCTGAAGAGTCATTGAGAGAACAGCTAGAAAAAGCAAAGAAAAAGGAAGCTGCTTTCATTGTAACATTTGCTAAACGGGAGCAGGAGATTGCAGAATTGAAGTCTGCAGTCCGGGATTTGAAAGCTCAACTGAAGCCACCATCAATGCAGGCAAGGAGGTTATTACTAGATCCAGCAATTCATGAAGAGTTCACACGTTTAAAGAATTTGGTTGAGGAGAAGGAAAAAAAAGTGAAGGAGTTGCAGGATAATGTTGCTGCTGTCAATTTTACTCCACAAAGCAAGATGGGGAAGATGCTAATGGCAAAATGCCGAACCCTGCAGGAGGAAAATGAGGAAATTGGAAATATAGCTTCTGAGGGAAAGATGCATGAATTAACAATGAAACTTGCTTTGCAAAAATCTCAAAATGCAGAGCTCAGAAGTCAATTTGAAGGACTGTACAAACATATGGAGGGACTGACCAATGATGTGGAAAAGTCAAACGAAATGGTGCTAATCTTGCAAGAGCAGTTAGAAGAGAAGGATTCGGAGCTCAAAAGGCTGAAGGAAGAGCTGGAGCAGAAGACGCAAATGGAAGCTGAAAATAATGATTCAGCTTCCGATAAGAAAGTTAGTGATGATGCAACGATACCTGTGGAAGATGGAAACTGAGCTTTAGGTTTGACTGAGCTGTTAGGAAATTTCAAATTTTTGGCCTCGCTGTCTGTACATTAAACATTAATTTGGTTCTTAGCTCAAGTGCACTGAGCTATTAGGGAATTATTGAATTTTTGTTGCCGCTCATTGTCTGTACATTAAACATTAATCTGGGATTTTTATTTGAGCAAAAAAAAAAAAAAAAAAA | |||||||||
gi|156737556|gb|EV241677.1|EV241677 VV_PEd02a11.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence TCTTGCTCAAATGAGTATTCCA EST sequence (targeted fragment marked with yellow): TTACATGACCCGCGGGGCGGCGCTCTGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACCATGCAATAATAAACCTTAAAAAACCTACTTCTCTGCTGCAACAATGGAGGGAGCAAATGGGTACAGAAAGGGTCTGTGGACAGTGGAGGAAGACAGAATTCTCATGGATTACATAAGGGTTCATGGTAAAGGCAAGTGGAATCGCATTGCCAAAGTCACAGGTTTGAAGAGGTGTGGCAAGAGTTGCAGATTAAGGTGGATGAATTATCTAAGTCCCAGTGTAAAGCGTGGGGATTTCTCTCAGGAAGAAGACGACCTCATCATCCGCCTTCATAATCTCCTTGGAAACAGGTGGTCTTTGATTGCTGGGCGTGTGCCGGGAAGGACTGATAACCAAGTGAAGAACCATTGGAACACTCATTTGAGCAAAAAGCTCGGAATCAAGAAGCACAAAAGTAAAAGTGAAGGTTCCTCACAGGCACAATCCATTGAAGCTAAGGAGGCTCACAGTATGCCATCAAACCCAGATTCTAAACCACCTTCAGAAGACAAAAATGGAGAAACTGGCCCCGAAGTGAGGGAAGATCTCCCCAGAAGCATGACCATGTTGGCTAACACACAAGATATGGAAATGGGCACAGAGGATTATGAGAGCTCTCTTTGGTTTTCTACTGGTGATTTAGATCTAAATGCTCCCAGTTTAATGCAATTTCTTGATGGCCATGTTCTTGATTTTGTTTGGGATGGCTTGTAACCATTGCTTTGGGCTTTAATCAAAGTTTTTCCCCCTCCAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCAACTTAATCGCCCTGCAGCACATCCCCCTTTTCGCAGCTTGGCGTAATAACAAAGAGCCCCGCACCCGATCGCCCTTCCCAACATTTGCGCAACCTGTAATGCCAAAGGGCAAATTGTAACCCTTAAATATTTTGTTAAAATTCCCGTTTAAATTTTTGT | |||||||||
gi|110728786|gb|EE104657.1|EE104657 SBB06418 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB06418, mRNA sequence TCTTGCTCAAATGAGTATTCCA EST sequence (targeted fragment marked with yellow): AGTTTTATCTCTTGGATCAAACTGTGGCCGCTGGTGTATGCCTCTGGCTGATTGCTAGTCTCATTTACAAAATCGAAATCAGTCAAACCCTACCTTTGACGGCGAGGCATCGCACAACTGTTAAATTTATCGCTCCCCAAACACTCCCAGAGAAAACCCTAGAAATCCCGACAGAGCCGCAATCCCCAATCCATGGCGACGAACACGCCCAATTTGGAGTGCCGCATGTACGAAGCCAAGTACCCAGAAGTGGACATGGCGGTGATGATTCAGGTCAATAACATTGCCGACATGGGCGCGTACGTTTCGCTGCTCGAGTACAACAACATCGAGGGTATGATCCTCTTCTCCGAGCTCTCTCGACGTCGGATTCGAAGCGTGAGTAGCCTGATCAAGGTGGGACGCATCGAGCCTGTGATGGTCCTTAGGGTTGATAAGGAAAAAGGGTATATTGATTTGAGCAAGAGGAGGGTTTCAGAGGAGGATATTCAGGCGTGCGAGGAGAGGTACAATAAGAGCAAGCTTGTTCACTCGATTATGCGGCATGTTGCCGAGACCATGCAGCTTGATTTGGAGGATTTATACATCCACGTCGGATGGCCTTTATACCGAAAATATGGTCATGCTTTTGAGGCATTTAAGATAATTGTGACTGATCCTGATTCCGTTCTGAATTCCCTCACTCGTGAAATTAAAAAAATTGGGCCCTGATGGACAGGAGGTGACAAAGGT | |||||||||
gi|110427164|gb|EC993595.1|EC993595 WIN1148.C21_N11 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TCTTGCTCAAATGAGTATTCCA EST sequence (targeted fragment marked with yellow): GATAAGATCCTCTGCAACTATGTGAAAGTCCATGGAGAAGGGAAATGGAGAGACCTTCCTCAAAGAGCTGGTTTGAAAAGATGTGGGAAGAGTTGCAGACTGAGATGGTTGAATTATCTGAGGCCAGACATTAAGAGAGGCAACATCTCTTCGGAAGAAGAAGAACTCATTATCAGACTGCATAAGCTCCTTGGCAACAGGTGGTCATTGATCGCCGGTAGGTTGCCGGGGCGTACGGACAATGAAATCAAGAACTACTGGAACACAAATTTGAGCAAGAGATTGCAAGCATCCAAGGGTCAAAATTCACCTGACAAAAAGGTCGAAAATCCGAAAAACCAGACTTCAGGAACTGGGAAATCATCAGCGGAACCTCACACAGTCATCCGAACAAGAGCAGTGCGATGCTCCAAGGTTATAATCCCTCGAGTCCAGGCCGATTTCGACGAAAACCCGTCTCCTAAAATGGCAGTTCCCACATCGGAGCCCTCAAGTTCAGCACTGGAACAGGGCGAAACAGCCAATTTTTTCATGGGCTTCGACATTGGCGACCTCCTTACCTCTGATGCTCTCAACTCATTTCTAGACCAAGATGAAGAGATGGGAGAAAATAACAGTAATGGGGTGATCGACCACTTTCCTCCTTGTTCCGATTTTCTCGCCCCGGAGATTGAGAATCAAGAAGGAGTGAGTGGTCTTCTTCAACCCAGCGAAGCTTTGGAGCTCACGACACTGGCATCTTTTCTGAATTCTGAAGATGAATGGATTACTGAAAATAATCAAGTCCCATAGCTTCTTCATGCATGTATGCACGCATGAACACTTATTTTATGTGTCTTTGTAGGGCACAGAATTGGAATAAGACACCATTATGGCTGATTGGATCCTTCAATTAAAAAAAAAAA | |||||||||