| mature miRNA: TCTTGCTCAAATGAGTGTTCCA species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110427164|gb|EC993595.1|EC993595 WIN1148.C21_N11 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TCTTGCTCAAATGAGTGTTCCA EST sequence (targeted fragment marked with yellow): GATAAGATCCTCTGCAACTATGTGAAAGTCCATGGAGAAGGGAAATGGAGAGACCTTCCTCAAAGAGCTGGTTTGAAAAGATGTGGGAAGAGTTGCAGACTGAGATGGTTGAATTATCTGAGGCCAGACATTAAGAGAGGCAACATCTCTTCGGAAGAAGAAGAACTCATTATCAGACTGCATAAGCTCCTTGGCAACAGGTGGTCATTGATCGCCGGTAGGTTGCCGGGGCGTACGGACAATGAAATCAAGAACTACTGGAACACAAATTTGAGCAAGAGATTGCAAGCATCCAAGGGTCAAAATTCACCTGACAAAAAGGTCGAAAATCCGAAAAACCAGACTTCAGGAACTGGGAAATCATCAGCGGAACCTCACACAGTCATCCGAACAAGAGCAGTGCGATGCTCCAAGGTTATAATCCCTCGAGTCCAGGCCGATTTCGACGAAAACCCGTCTCCTAAAATGGCAGTTCCCACATCGGAGCCCTCAAGTTCAGCACTGGAACAGGGCGAAACAGCCAATTTTTTCATGGGCTTCGACATTGGCGACCTCCTTACCTCTGATGCTCTCAACTCATTTCTAGACCAAGATGAAGAGATGGGAGAAAATAACAGTAATGGGGTGATCGACCACTTTCCTCCTTGTTCCGATTTTCTCGCCCCGGAGATTGAGAATCAAGAAGGAGTGAGTGGTCTTCTTCAACCCAGCGAAGCTTTGGAGCTCACGACACTGGCATCTTTTCTGAATTCTGAAGATGAATGGATTACTGAAAATAATCAAGTCCCATAGCTTCTTCATGCATGTATGCACGCATGAACACTTATTTTATGTGTCTTTGTAGGGCACAGAATTGGAATAAGACACCATTATGGCTGATTGGATCCTTCAATTAAAAAAAAAAA | |||||||||
gi|156737556|gb|EV241677.1|EV241677 VV_PEd02a11.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence TCTTGCTCAAATGAGTGTTCCA EST sequence (targeted fragment marked with yellow): TTACATGACCCGCGGGGCGGCGCTCTGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACCATGCAATAATAAACCTTAAAAAACCTACTTCTCTGCTGCAACAATGGAGGGAGCAAATGGGTACAGAAAGGGTCTGTGGACAGTGGAGGAAGACAGAATTCTCATGGATTACATAAGGGTTCATGGTAAAGGCAAGTGGAATCGCATTGCCAAAGTCACAGGTTTGAAGAGGTGTGGCAAGAGTTGCAGATTAAGGTGGATGAATTATCTAAGTCCCAGTGTAAAGCGTGGGGATTTCTCTCAGGAAGAAGACGACCTCATCATCCGCCTTCATAATCTCCTTGGAAACAGGTGGTCTTTGATTGCTGGGCGTGTGCCGGGAAGGACTGATAACCAAGTGAAGAACCATTGGAACACTCATTTGAGCAAAAAGCTCGGAATCAAGAAGCACAAAAGTAAAAGTGAAGGTTCCTCACAGGCACAATCCATTGAAGCTAAGGAGGCTCACAGTATGCCATCAAACCCAGATTCTAAACCACCTTCAGAAGACAAAAATGGAGAAACTGGCCCCGAAGTGAGGGAAGATCTCCCCAGAAGCATGACCATGTTGGCTAACACACAAGATATGGAAATGGGCACAGAGGATTATGAGAGCTCTCTTTGGTTTTCTACTGGTGATTTAGATCTAAATGCTCCCAGTTTAATGCAATTTCTTGATGGCCATGTTCTTGATTTTGTTTGGGATGGCTTGTAACCATTGCTTTGGGCTTTAATCAAAGTTTTTCCCCCTCCAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCAACTTAATCGCCCTGCAGCACATCCCCCTTTTCGCAGCTTGGCGTAATAACAAAGAGCCCCGCACCCGATCGCCCTTCCCAACATTTGCGCAACCTGTAATGCCAAAGGGCAAATTGTAACCCTTAAATATTTTGTTAAAATTCCCGTTTAAATTTTTGT | |||||||||
gi|110389257|gb|EC954080.1|EC954080 WIN0560.C21_K02 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone TCTTGCTCAAATGAGTGTTCCA EST sequence (targeted fragment marked with yellow): GGTTCCAGATACCTTGATGCTGGGCAACCTAGCAGCAGCAATGATGTTCTGCATTTGAACATCAATTTGAGCAAGAAAGTCAATTGGCTCTGCACAACTCCAGCTGATTCAGAAAACCTTGTGGTATGTGACACAACCAAAGTAGTAAAGGTTCATACCGTTTCATAGCTTATTCAGAAGCCTGGTCAAGTAAAGGTTTATACCGTTTCATAGCTTATTCAGAAGCCTGCGCCGTGGATTGTCATTCATGGAAAGCATGCCCTATCTCTGGCATGGTAGCAGGTGGCTTTCTGTCTCTATCAGTTTTGAACATATGGTCGGCTAGTTTATGTCTGATCACAGATTGTATATTGAGAAGATTTATGGTTCCAAGCATGTGGAGCCCATAATAGTATTGAGGCATTTTAGGACAAAATTTTCCTAGAATTAGGTGGAAGATGGCCAATTTTGTGTAATACACACAGTAGTTGAGTTGAGACAACTTTTTGAAATTCATGCTTCAAACTGGAATCATGTTGTATTGTTTGGCATAAAAGGAAGAGCTGTCAAGTTGCCATTCTTAA | |||||||||