| mature miRNA: TGACAACGAGAGAGAGCACGC species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110703130|gb|EE079707.1|EE079707 S2B21581 Buds (VvS2) Vitis vinifera cDNA clone S2B21581, mRNA sequence TGACAACGAGAGAGAGCACGC EST sequence (targeted fragment marked with yellow): AGAGATGTTCATATCATCACTGCTTAGGTTCAACTTTTATGCCCAAGCTTCAAGGAAAGTTTTTGGCAACAGAAAATTTCTTTTATACATCAAAGTTCTTCGGGTTGGGTTCACGGGCATTTCTCTCTGATCTGACGGTGGCTGGACAACATTTCTGTGAAGAGGATTGGTCAAAGTTGAAAAGGAAGTATTATTCATTCAATGAGGAAGATTTATTGCACTATTGCTTCTCTTCAGCATATATTGTGGCTTTTCTTCATGATAGTCTTGGAATTGCTTTGGATGATGAAAGGATTGGATACGCAAATCAGGTGGGAGATATCCCACTGGATTGGGCCTTAGGAGCTTTCATCTTGCAGAGCACAACCAACTTGGAAGCAGAGCACTCTGATTGGATCACCACGGTTGTCAGTGATGAGTCCCCAACCTTGCTCTCTCTAGTTGTCATCTTAATCATATTGATGTTTACAGTTTGGTCTATATCAAAGTGTAAGAAGCCCCAGTTGAAGATGATCTATGATTTAGAGAAAGGACGGTATATAGTCACTCGAATCAATAGATGTTCATAGTTTATCCCAGAGAAAATGCTCCTCCCTGGTTTTGCAGATCANGATTGTAATTGCAGCATCTTATTTTATTTTTCTAATGCTTCTTCAGTCTAGTGTACAAACAAAACCCACTCCANGGTACAATGCTGATGGGGAAATTTATGGTAATATAGTATATGTACATTATGAAGTTTCAACACAGAATACAGATTCT | |||||||||
gi|156727784|gb|EV231895.1|EV231895 VV_PEa23f11.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence TGACAACGAGAGAGAGCACGC EST sequence (targeted fragment marked with yellow): AAAGGTGATNGGCGGAGAATCGGCATACGGCCGGGGCACAGAAAATTTCTTTTATACATCAAAGTTCTTCGGGTTCCGTTACGGGCATTTCTCTCTGATCTGACGGTGGCTGGACACCATTTCTGTGAAGAGGATTGGTCAAAGTTGAAAAGGAAGTATTATTCATTCAATGAGGAAGATTTATTGCACTATTGCTTCTCTTCAGCATATATTGTGGCTTTTCTTCATGATAGTCTTGGAATTGCTTTGGATGATGAAAGGATTGGATACGCAAATCAGGTGGGAGATATCCCACTGGATTGGGCCTTAGGAGCTTTCATCTTGCAGAGCACAACCAACTTGGAAGCAGAGCACTCTGATTGGATCACCACGGTTGTCAGTGATGAGTCCCCAACCTTGCTCTCTCTAGTTGTCATCTTAATCATATTGATATTTACAGTTTGGTCTATATCAAAGTGTAAGAAGCCCCAGTTGAATATGATCTATGATTTAGAGAAAGGACGGAATATAGTCACTCGAATCAATAGATGTTCATAGTTTATCCCAGAGAAAATGCTCCTCCCTGGTTTTGCAGATCAGGATTGTAATTGCAGCATCTTATTTTATTTTTCTAATGCTTCTTCAGACTAGTGTACAAACAAAACCCACTCCAGGGTACAATGCTGATGGGGAAATTTATGGTAATATAGTATATGTACATTATGAGGTTTCCCCCNNACTTTCCATTCAAAACAAAAAAACATGTCGGCCGCCTCGGCCCAGTCGATTCTAGACTCAAGCAAGCTTATGCATGCGGCCGCAATTCCAGCTCACTTGGCCAATTCCCCCTATAGTGAGTCGTATTACAATTCACTGGCCCGCGTTTTACCACGCCGGGACTGGGAAAACCCCGGGCGTACCCAACTTATTCGCCTTGCAGCAATTCCCCCTTTCGCCCACTGGGCTAATAAGGAAAAAGGCCCCCCCCCGATTGCCCCTTCCCACAATTTGCCCCACCCTCAATGGCCAAAGGGGAAATTTTAAGCCCAACAATATTTTTTTTAAAAATTCCCCGTTAAATTTTTTTGTAAAACCCCCCCTCTTTTTTTTAACCCAAAAAGGGCCGAAAATTCGGCCCAAACCCCCCTTTATAACTCTCAAAAGAAAATGACCCC | |||||||||