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mature miRNA: TGAGCCAAGGATGGCTTGCCG
species: Vitis vinifera
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|122690629|gb|EC955291.1|EC955291 WIN0564.C21_E12 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone 

TGAGCCAAGGATGGCTTGCCG
||||||||.|||| |...||.
ACTCGGTTTCTACAGGGTGGT

EST sequence (targeted fragment marked with yellow):
TATTGTTATGCTTACATTGCAAGACCTTTACGAAATTTGTGCACGTACAAATTTCAGGCATGCTTGGTGGGACATCTTTGGCTCATTTCTTTCGCTAAAAAATTGATCATTATTTAGATGATATCTAAAAAAACTCAAGCTACGCATGTCAAAAAGGGTGATGACAAGATTGTCATTACTCAAGCAACACGAGTACCTCTTCGGGCCCCATGACTAGTAACAAAGGGAAATTTGAAGCAACGTGTTGGCCATTTCGTCGAAACTTGTAGCCAAGTAGGTATAGAGTGTGACCTCTTGGTCAAACAATTTGTTCAATCCCTTCAAGGGAATGCCTTTGATTGGTATATCGACCTTACACCCAAGTGCATTGACAATTAGGACCAAATGGAGTGTGAATTCCTCAATTGCCTCTATAACACTTGACAAACTGTAAGTATGATTGAGCTAACCAATACCAAGCAAATGAAAGACAAGTCGGTTGTTGACTACGTTAATCGTTGGCGTTCCTTAAACCTTGACTGTAAGGATAGGTTATATGAGGTGTTAGCTATGGAGATGTGCATACAAGGTATGCATTAGGGTCTTTTGTACATTCTCCAAGGGATACGATCCCACACCTTCAAAGAGTTGGCTACACGAACACATGACATAGAGTATGTTATAAAAATAAATGAAAGTAAAAGCATGTCTATGGAAGAAATTGAAGATGATAGCACTAGAGACAAAAACATCACTAATGAGGATGAAAAGAGTGTGACATCAAATTTCACTACAATTGTTTTTAAACCTTAACACTCCAGTGTTGCTCTTTAATGCATGAGCCTAAACTGCTTATTGCTCCTATCCTATATGATCTTACATTGTAG


gi|110416502|gb|EC982488.1|EC982488 WIN1116.C21_B18 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo 

TGAGCCAAGGATGGCTTGCCG
||| ||||||||||||.|  |
ACTAGGTTCCTACCGAGCCCC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTCCACTACAACAGTTGTATACCAAAACCTTAGATTAGGTTACAAGAGCAGTAAATTCAACATTCATCAAGCAAGGAATCAAATTCAAGCCCAGCTGCCTACTGTGACAACGAAGCACTGAGGGAGCTGCCAGTTAAAAAAACAATTGTAATCCAGAAGTCACTGTATTTGTTGTTATATGAGAACAAAAATCTCCTTATTTGAAGGAACCAAAACTTCTTCAATGATAAAATCCCTTAACTGAAATTTTCTTAGTATTTCCCTCTCCATGAATGCCATTTGAGTTTCAATTGGAACCACAAAGGAGGAATACCAAGAATCCCCCGAGCCATCCTTGGATCAAACACATTGAATTGCACCCGACTCAGGGAGTCCAAGATAACCTGGGCAGGCACAGCTGGTAGAAGCACTGGAAGAGCCTCAGCAGGTACTGTTCCAGCTAATTGACGAGCCTTCTCCAAATGGGCATT


gi|110390014|gb|EC954897.1|EC954897 WIN0563.C21_B20 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone 

TGAGCCAAGGATGGCTTGCCG
 ||||| |||||| ||.||||
CCTCGGCTCCTACAGAGCGGC

EST sequence (targeted fragment marked with yellow):
GTTCGCATTCAAGAGAGTGCCCTTCGATTACTATGACTGGCCGATCGAAGCCCGGCGAGACATCCTCGGCTCCCCCTCAATCCACCATCTCTGCAAAAGCATCGTTCTTGTCAATACTCAAGCTCCATCCAATGTTACTGACTGTAGTGACCGCAACAATTCAAAGTATTATATTGTTGTTGTTCAGTATACTGCTAGATTCAATGCTGAAACTGTGAAGAATTTTCTGTATTCACTCAACAATGGCAAGATACCAAAGAAGAAATTCAACTTGAGGCTTGCTCCTGAGGAGTCATCACAGAAATTGACTGGATATGAGCACAATGGGGTGACATGTATTGGCATGAAAACCGACATTCCGGTGATTTTGGATGAAGCAATTGTAAAGCTTGATTCCAATTTCTTCTGGTTAGGAGGTGGGGAGATTGATCTGAAGCTGGGGATCAAGACTTCTGAATTCATTAACTTTGTTAAACCTTTCATTGTCAGCTGTAGTGGTATTTAATTTCCCCAAAGATCCACAACTCTTGGAATGGAACCGCTCGACTGAGACGATGGAATGGAATCTCTTAAACGTGATGATGTCAAGGAAGATGGCCTCATGGTGGACCTTGCTCCTTTTGGGGTCCAATTCTAGGATTTTGGTAATCATTAAAGCAGGAAATTTTGCTTTACATATATTTATTTTTAGTTAGTTTTTGGATGTTGAAAATTCATTCGAGAGTTTTGTAGTTTAATTGTTATATTCAACGACTTGCACGACAAAACGTAACGTGATAATTTCTTAAAAAA