mature miRNA: TGCCAAAGGAGAATTGCCCTG species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|156738723|gb|EV242844.1|EV242844 VV_PEd18b07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence TGCCAAAGGAGAATTGCCCTG EST sequence (targeted fragment marked with yellow): CCATGATCCGCGGTGGCGCCGCTCTGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTTTTCGTTGCTTTCTCATCTCTTATGGCTTCAGCTTCAACGAATCAAGCAAGCCTTCTCCTCCAAAAACAGCTCAAAGATCTTTGTAAAAATCCCGTCGATGGCTTCTCCGCCGGTTTGGTCGACGAGAGCAATATCTTTGAATGGAGTGTCACCATTATTGGACCTCCCGATACTCTGTATGATGGGGGATTTTTCAATGCCATCATGAGCTTTCCACCCAATTATCCAAACAGTCCTCCAACAGTGAAGTTTACTTCAGAAGTGTGGCATCCCAATGTTTATCCAGATGGACGAGTATGCATATCAATTCTCCATCCTCCTGGTGAGGACCCAAATGGATATGAGCTTGCAAGTGAGCGCTGGATGCCAATCCATACGGTTGAAAGTATAGTTTTGAGTGTCATATCAATGCTTTCCAGCCCTAATGATGAATCACCTGCAAACATTGAAGCTGCAGTAAGTGACACTTACTTGTATGCCACCACAATTCTCCTTTGGCAACTTCTCTTTATTTTATGGTGCTTGTAATTTACCTTTCTACGTTGACAATAGGCTGAACTTGTTAATTACAAGCTATGCTGCTTACATGCTTTGTGTATGTGCATACCCAAATGCTGTCAATGTCATGATACCTGTGAACTACATTAAGGCGTAGGTAATATTTTCAGAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTTCGCCAGCTGGCGTAATAGCGAAAAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAAGGGCGAATGGCCAAATTGAAGCGGTTAATATTTTTGTTAAAATTCGCCGTTAAATTTTTGTTAAAATCAAGCCCTTTTTTTTAACCCAATAGGGCCGAAAATCGG |