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mature miRNA: TGCCAAAGGAGAGTTGCCCTG
species: Vitis vinifera
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|156738723|gb|EV242844.1|EV242844 VV_PEd18b07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence

TGCCAAAGGAGAGTTGCCCTG
||||||||||||.||| ||
ACGGTTTCCTCTTAACACCAC

EST sequence (targeted fragment marked with yellow):
CCATGATCCGCGGTGGCGCCGCTCTGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTTTTCGTTGCTTTCTCATCTCTTATGGCTTCAGCTTCAACGAATCAAGCAAGCCTTCTCCTCCAAAAACAGCTCAAAGATCTTTGTAAAAATCCCGTCGATGGCTTCTCCGCCGGTTTGGTCGACGAGAGCAATATCTTTGAATGGAGTGTCACCATTATTGGACCTCCCGATACTCTGTATGATGGGGGATTTTTCAATGCCATCATGAGCTTTCCACCCAATTATCCAAACAGTCCTCCAACAGTGAAGTTTACTTCAGAAGTGTGGCATCCCAATGTTTATCCAGATGGACGAGTATGCATATCAATTCTCCATCCTCCTGGTGAGGACCCAAATGGATATGAGCTTGCAAGTGAGCGCTGGATGCCAATCCATACGGTTGAAAGTATAGTTTTGAGTGTCATATCAATGCTTTCCAGCCCTAATGATGAATCACCTGCAAACATTGAAGCTGCAGTAAGTGACACTTACTTGTATGCCACCACAATTCTCCTTTGGCAACTTCTCTTTATTTTATGGTGCTTGTAATTTACCTTTCTACGTTGACAATAGGCTGAACTTGTTAATTACAAGCTATGCTGCTTACATGCTTTGTGTATGTGCATACCCAAATGCTGTCAATGTCATGATACCTGTGAACTACATTAAGGCGTAGGTAATATTTTCAGAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTTCGCCAGCTGGCGTAATAGCGAAAAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAAGGGCGAATGGCCAAATTGAAGCGGTTAATATTTTTGTTAAAATTCGCCGTTAAATTTTTGTTAAAATCAAGCCCTTTTTTTTAACCCAATAGGGCCGAAAATCGG