| mature miRNA: TGCCAAAGGAGATTTGCTCGT species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110422744|gb|EC989074.1|EC989074 WIN1135.C21_I16 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TGCCAAAGGAGATTTGCTCGT EST sequence (targeted fragment marked with yellow): CTTCCAGACATATATGCAAACTCGGGGGGAGTCACTGTCAGTTATTTTGAGTGGGTTCAGAACATTCAAGGTTTCATGTGGGATGAGGAGAAAGTAAACAATGAACTGCGGACGTACATGACCAGAGGGTTCAAAGATGTGAAGGAGATGTGCAGAACCCACAATTGCGATCTGCGCATGGGAGCATTCACCCTTGGAGTTAATCGTGTTGCCAGGGCAACCGTCCTTAGGGGTTGGGAAGCCTAAGAGGGTTGCTATCTGAATAAAGATGAGGGAGTCTCCTTTGGGACAAGAGTCCCTCATTCTTGTCCGTGTTTGATATGCCTGTTGCATTTTAACTAGTTCAGCAATGGTTTTGTCATTCCCTTTATGGGCTTTAATCTTATTAGCTGTATCGACAATTTCATAAGGTTTAATCATCATCTCCTATTTAAGGAAAAAAA | |||||||||
gi|122690415|gb|EC952375.1|EC952375 WIN0555.C21_H22 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone TGCCAAAGGAGATTTGCTCGT EST sequence (targeted fragment marked with yellow): GTTTCTTTTATTATATACATAGTGATGTATATTTACACGAGTATTCAAAACAAGCACATCAATCATATATAGCTTGTTGGATCCTGTTGTTTCTGACTGGAAATCATCACCATGAATTGCAAAATATCTGCTTGATCAGAGCAACTTTGCGAAATGGGTTCCTGTATATGGCAGCAACTTGACTTGTGGGTCTACAAGTGAGTGTTACCTTCTTCTCCAACACATTCACTTCCACCGACTCCATCTCTGCATTCATTCTTGAAATTATAGCAGCAATTCTCTTTTGGCATTCAACACACTGAAAATCTGCAGAGATGACAACTTCCTGGATAAGAGGCATAGTTAAGGATTCAACAGAGGCAAGGGTAGTTCGATGAATCTGTGAGCTCCTTGACTTTTTGAACCCAATTATAGGAAGCTCCTTCTTGACCCCATTCACAACCGCCATGGCTTTGCTTTGTGATCATTCAGACATAAGCAACAGGGGGGCTTTATAAAGGATACAAGGTGGATCCGTGTTTGAGAGAGAAGGATGGAGGAAGAAAAGGATCTAAGAGCAGCTCCTACTGAACTGACAGAGCAATCCC | |||||||||
gi|110695999|gb|EE074656.1|EE074656 C4B05885 Berries veraison stage (VvC4) Vitis vinifera cDNA clone C4B05885, mRNA sequence TGCCAAAGGAGATTTGCTCGT EST sequence (targeted fragment marked with yellow): CGTCCTCATCCCAGCAGCCCTTGGGGGTGTGATCAACAGGGAAAATGCAAATGAAATTAAAGCCAAATTTATTATTGAAGCAGCCAACCATCCAACAGACCCTGAAGCAGATGAGATCCTATCAAAGAAAGGTGTTATCATTCTTCCAGACATATATGCAAACTCGGGGGGAGTCACTGTCAGTTATTTTGAGTGGGTTCAGAACATTCAAGGTTTCATGTGGGATGAGGAGAAAGTAAACAATGAACTGCGGACGTACATGACCAGAGGGTTCAAAGATGTGAAGGAGATGTGCAGAACCCACAATTGCGATCTGCGCATGGGAGCATTCACCCTTGGAGTTAATCGTGTTGCCAGGGCAACCGTCCTTAGGGGTTGGGAAGCCTAAGAGGGTAGCTATCTGAATAAAGATGAGGGAGTCTCCTTTGGGACAAGAGTCCCTCATTCTTGTCCGTGTTTGATATGCCTGTTGCATTTTAACTAGTTCAGCAATGGTTTTGTCATTCCCTTTATGGGCTTTAATCTTATTAGCTGTATCGACAATTTCATAAGGTTTAATCATCATCTCCTATTTAAGGAT | |||||||||
gi|110420966|gb|EC987253.1|EC987253 WIN1130.C21_C06 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TGCCAAAGGAGATTTGCTCGT EST sequence (targeted fragment marked with yellow): TTCAATATTTGCTTTCTTGTTGCACCATTTCTTTTCAATGTTGTCTTGGACCCTTGACTGGAAATTATATAAACCCTCTCCTTTAGCAAAGAGGGGAGTTGTAACCATAGAATTGTTTGGTCCTTCTGTTTCAACAATTCTAGTGACTACTACTCTCTTCTTGTACTGTCTTGTTTCCTCTGTTTCTTGAAAAGGAAACTAAGTATTGGAGATTGTGTATTCACTCCTTGCATGTATATCCACTTTTCGGTTTTCTGCCAACCATCCTACAGACCCTGAAGCAGATGAGATCCTATCAAAGAAAGGTGTTGTCATTCTTCCAGACATATATGCAAACTCGGGGGGAGTCACTGTCAGTTATTTTGAGTGGGTTCAGAACATTCAAGGTTTCATGTGGGATGAGGAGAAAGTAAACAATGAACTGCGGACGTACATGACCAGAGGGTTCAAAGATGTGAAGGAGATGTGCAGAACCCACAATTGCGATTTGCGCATGGGAGCATTCACCCTTGGAGTTAATCGTGTTGCCAGGGCAACCGTCCTTAGGGGTTGGGAAGCCTAAGAGGGTTGCTATTTGAATAAAGATGAGGGAGTCTCCTTTGGGACAAGAGTCCCTCATTTTTGTCCGTGTTTGATATGCCTGTTGCATTTTAACTAGTTCAGCAATGGTTTTGTCATTCCCTTTATGGGCTTTAATCTTATTAGCTGTATCGACAATTTCATAAGGTTTAATCATCATTTCCTATTTAAGGAAAAAAAAAAAAAAAAAAA | |||||||||