| mature miRNA: TGGCTCTGATACCAATTGATG species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110362419|gb|EC925952.1|EC925952 WIN0210.TB24.1_J13 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): ATGTGATCCTATGCGTTTTAAATTCTCATCAATTGGTATCAGAGCTTGCATGATTGACATTTGAGCTGCAATTTTGGGTCAATTTTTGGGTTTCCCGTTTCCTGTGGTGGAAGCCATTTTTTTGGAATTTTATTTCTCGTTTGATGTTGATTCTCTGTTTACAAGCCCGATTATTGTTGGAAACTTGTAGAGAATGTTGTTTGGAGCAAAACCCATCAAATTTTGTGATTTTTGGAGCTCATTTGATGATATTTCGAAAATTAGGGCTTGTTTGGTTCTTGCTATTATGCGGTTTTTTGTGCAATTTTTGGGTTTGGATTGAAGAATTGATGTTTTAGGATGGAAATCTATGTTTTTTTGACGAAAAATGCGTGAAATTTTGGGCGGAAAAAAATTTTTTTTTTTTCTTCTCCAGAACCAGGCCGTGCTCAGCTGAGGAGAAGATGAACAGTGACGTGAGACGTCATC | |||||||||
gi|156727522|gb|EV231633.1|EV231633 VV_PEa22b03.g1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): CATTGCATATTAGGCCTATGCATAAGCTTGCTCGAGTCTAGAGTCGACTGGGCCGAGGCGGCCCATAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCCCAAAATTCCGAAATTTATACCATCTTATGGAACCATTAAGGAGAACAGAAAAGAAAAGGACCCAATCGCTGGATGATAAAGGTCTTCTCTTAACATATTATTGCCCCCCCTTTACACACAAGGGATTTATTTATGCTGCTGTGTCTCAAGTTTCGAATTGAGCTAACCAAAACATCAATTGATCCTGATGAATCGTTGGGAACCTTCCTGCAGTCCAATCCGATCTCACCTTCAGTCCCTGTTAATGGGCTGATATTCCCCATTCTTATCATGGATTCAACAAAGCTCTCAAAAAAAACAGTTTCATTACTGGCGAATAAATTAACAATATCAATTGTATCAGATCCAGTAGCTGAAAACAGCTCCTGATCACTCTGCAACAGGCCTCGGTTCTCTTGAAGGGTAAAAAAGTAATTTTTGTCAAAACCATCTGGGGTCGTAGGGTCAAGGTTAGCTATGACAGTCCCATCCCCATCTTGAGGGCATAAGGCGCTTACTGTCTCTAATTAACATGAGCTCAGCGACGGGTCACGACTTTCTGTGCCACTGAAATTGTATATACCATCCCTGAAAAATCGGCATGCCCCCCTTCCAAATGTGGGACCACCCGATAGTGCAACCAAATCAGTGGTAGTGTTAAGGCCAACTGCTTCAAACACAGCCTTGAGCGTATTAATGTTTTGGCTGGGATTTGGAAGGGCGGAATCCGCACCAAATTTGGTTTGATATTCAGCCGTCCCTTTTTCCTAATAGAAATGTCCCCCACCGACCCTCCTGAAATACAATCTGATGCCTCCACTGCAAGGGCAAAAATAATCCCACAGGAAACTATTGCCTTGGCAAAAAGCTTCCCAACGCGGGTTTGATTTTTTTCAAAAAACCTTCAAAGCCCCCCCGGGCGCAAAATGGCCCAAATTTCCCGGGGTACCCAACCCAAGGGGCCCGCCTTTCCCGAAAAAAAAAAAAAAAAACCCTCCGCCCAAAAATCTGGAAACTTTTGGGGAATACACTTGGGCCCTAAGGTTGTTTCCTCGGTGGGAAAATTTGTTGTTCC | |||||||||
gi|110401237|gb|EC967840.1|EC967840 WIN0826.C21_A19 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0826_A19 3', m TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): GCTTTTGTTCTCTTTGAAGAACACTCCCGGCCACTCACGCACACACTCCACTTTGGACTGAATTTTGGGGATTAAAGGGAAGAGCTCATTGATCGTTCATCCTCGGAGCATCACGCACCCGGAAAGCAGATTATTGGACATCAAAGGTAGCAGAAATGGCTTCCCAAAGCACGAACCAAGGTAACGGATGAATTTTGCTATTAAATGCATGCTTAATTGTCATCATGTGATCCTATGCGTTTTAAATTCTCATCAATTGGTATCAGAGCTATGCATGATTGACATTTGAGCTGCAATTTTGGGTTAATTTTTGGGTTTCCCGTTTCCTGTGGTGGAAGCCATTTTTTTGGAATTTTATTTCTCGTTTGATGTTGATTCTCTGTTTTCAAGCCCGATTGTTGTTGGAAACTTGTAGAGAATGTTGTTTGGAGCAAAACCCATCAAAATTTGTGATTTTTGGAGCTCATTTGATGATATTTCGAAAATTAGGGCTTGTTTGGTTCTTGCTATTATGCGTTTTTTGTGCAATTTTTGGGTTTGGATTGATGAATTGATGTTTTAGGATGGAAATCTATGTATTTTTGACGAAAAATGCGTGAAATTTTGGGCGGAAAAATTTTTTTTTTTTCTTCTCCAGAACCAGGCCGTGCTCAGCTGGAGGAGAAGATGAACAGTGACGTGATGACGTCATCATGACGTCATAAAAAAAAAAAAAAA | |||||||||
gi|110689805|gb|EE066351.1|EE066351 C2B06810 Buds/little clusters (VvC2) Vitis vinifera cDNA clone C2B06810, mRNA sequence TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): CGTATACAAAGCTAGGGATACTTTGACAGGGAAAATTGTGGCATTGAAGAAGGTAAGATTCGACAATTTGGAGCCAGAGAGTGTAAAGTTCATGGCTAGAGAGATTCATATTCTAAGACGGTTGGATCACCCAAATGTGGTAAAATTGGAAGGTTTAGTGACTTCAAGGATGTCCTGTAGTCTATACCTTGTATTTGAGTATATGGAGCATGATTTGGCTGGACTTGCTGCAAGCCCAGGGATCAAGTTCACAGAACCTCAGGTCAAATGTTACATGCATCAATTATTATCAGGGCTAGAACACTGTCATAATCGCAATGTGCTGCACCGTGATATTAAGGGGTCAAATCTTCTTCTTGACAATGGAGGAGTTCTCAAGATTGCTGATTTTGGTCTGGCTTCTACTTTTGATCCTAATCATAAGCAGCCCATGACTAGTAGAGTGGTTACTCTATGGTATCGGCCACCGGAACTGCTTCTTGGGGCCACCGAATATGGTGTAGGTGTGGACCTCTGGAGTGCTGGCTGCATTCTAGCTGAGTTATTGGCCGGGAAGCCTATCATGCCTGGTCGCACCGAGGTGGAGCAGCTACACAAGATATTTAAGCTATGTGGCTCTCCTTCTGAAGAAACTGGAAAAAATCAAAGTTGCCGCATGCAACCATATTTAAGCCTCAACAATCATACAAGCGATGCATAGCAGAGACCTTTAAGGATTTTCCAGCATCATCATTGCCCCTAATTGAGACACTTCTTGCAATTGATCCAGCTGAAC | |||||||||
gi|156727102|gb|EV231213.1|EV231213 VV_PEa19e07.g1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): GGGGGGGGNNCCAGGACCAATGCGGCGCAGCATAAGCTTGCTCGAGTCTAGAGTCGACTGGGCCGAGGCGGCCGATATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCGTTGGAAGACTTTACCTTAAGGGTATCAAAGTCTAAAAATTCCGAAATTTATACAATCTTATGAACGATTAAGGAGAACAGAAGAAAAAAGGACCAAATCACAGGATGATAAAGGGCTTCTCTTAACATATTATTGCCACCCCTTTACACACAAGGGATTTATTTATGCTGCTGGGTCTCAAGTTTCAAATTGAGCTAACCAAAACATCAGCTGATCCTGATGAATCGTTGTTAACCTTCCTGCAGTCCAATCGGATCTCACCTTCAGTCCCTGTTAATGGGCTGATATTCCCCATTCTTATCATGGATTCAACAAAGCTCTCAAAGAAAGCAGTTTCATTACTGGCGAATAAATTAACAATATCAATTGTATCAGATCCAGTAGTTGAAAACAGCTCCTGATCACTCTGCAGCAGGCCTCGGTTCTCTTGAAGGTTAAAAAAGTAGTTTTTGTCAAAACCATCTGGGGTCGTAGAGTCAAGGTTAGCTAGGACAGTCCCATCCCCATCTTGAGGGCATAATGCGCTTAGTGTCTCTAAGTAAGATGAGTTCAGCGACGGGTCAGGACTTTCTGTGCCACTGAAATTGTATATACGATCGCTGAAAAATCGGCATGCACCCCTTCCAAATGTGTGAGCACCAGATAGTGCAACTAGATCAGGGGTAGGGGTAAGGCCAACTGCTCCAAACACAGCCTTTGACGTAATAATGGTTTGTCTGGGATTTGGAAGGGCGGTATTGGCACCAGATTGGTTTGCTATTCTGCCATCCCCTTCTTTCCTAAAAAAAACTGTCCCCCAACGGGACCTCCCTGACAATATCAAACTGGAGTGCCTCCACGCTTGAAATGGGCGAAAAAAATATCACCCACCAGGGAAAACGATTGCCCTTTTGGGCAAAAAAGCTTCTCTCCCAGCGGGGGGTCTTTTGTTGGCTGGTCTAACAAAACCCTCAAAGACCCCCCTCCCGTTGAGAATTTTGCGAATTTTGGGAAAATTGGCCTTTCTTATCCCCGGGCGTAAATAAAGGGGGTTCC | |||||||||
gi|110424182|gb|EC990538.1|EC990538 WIN1139.C21_N15 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): CCAATGGTAATGCAAAATGAATAGTCCAAAACTACATGGGAAATCCCTGGTTTTCTGTCTACAAAGAAAATTGTGAGGGTGCCATGAATGGTGATTGTTGGGGTGCAATAATACAGCTCTTAAGTTCAGGGATGGGTGCATGGTGTGATGTTGAATGTTATAAAGGTTTGGTTTACTTTCATCGAACACTAATTGGTTTTTAGATAAGGTGATTAAAGCTCGATCCGGAAATTAGTATCAGAGCCAAGGGTTATGGTTTCTAGTTAGGGAGTGTCATATAACCTGGGAATGGATCTCGTCCAAATGATGGTTCTTAAAACAGGGTTGTAATAATGATCAATTTTTTTTGAAATGAATAGCATCTATAGGCTCGTTTGATGGGCTCAGTAAGACTGACTGTTGGTGTCTCTGCATTCCTGAGTTGCAGTTGTTTGTAGAGAATAGCACTGCAGTATTTTTGGCCTCACCTTCCTTATTATTTTCCTGATGTTTGGACCACACATGGCCCAATTCTCAAAGCAGATATGGCAGAGAGAATAGCAACATATGGAGAATGAGCTGACTGCCAGAGCCTTAGCAGCTGGAGGGTAAGAGCCAGGCCATCAACACCATGAGGCATAAGCAATAGAGTTCCCTCGACTTGAAAAACCAAGCGGCCAAATCAGAAGCAATTTAGTTTTGGCCTAGGCGCAAGTGACATTCATGCAGTCAGACGGGAAGCAGCCTATGAGAATGCCATGTGTCCTGAGACATGCGAGACCCACCAGGAGAGGCCAATGGTTGAAGTTATAACTACACCAAAAGGGCCATTAAGTCTTTCATGGAATAATGAAGTGATTTGAAGCTTGCATTTTCTTTAAGCATTGGTAATGGGAAATAAAGATTAAATGCAATCAGTTTTTTCTCCAAAAAAAA | |||||||||
gi|110728309|gb|EE103766.1|EE103766 SBB04740 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB04740, mRNA sequence TGGCTCTGATACCAATTGATG EST sequence (targeted fragment marked with yellow): GCAAACTTTTAAAGGGTGGTGAGCCTGACTTGATGACTGTGGCAAAGATGGTCCTCCATGACTGGCAGAGAGGTAGAATCCCCTTCTTCGTTCCCCCTCCAAGGCAGCAGGAAGGTGACTCATCAGATGAACCCAGTACTTTGGGCGTGGAGAAAGATACAGCAGTTGATGATAATCAGGCATCAGCTGCTATAAGAGCCATTGCAAATGTTATTTCATCCCAGCAGACTATGAATGTCCCTGTTCAAAAGGATCTTTTCAGTGAGAGAGAGTTGGAAGGTGACAACTCTGAGCTGCCTCGAGTCCTTGACTCATAAGTTTTTTTTCACACAGAAAAGGAAGTGCAGTGATAATGAATGGTTTACCAGTCCCCAAGTTTTGTAGCTCAAGAATCCAGATTCTCTAGAGAAGTTTTTGTCATATTCTGTTTGATTTTGTGGACTGAATAACAGTGTTGTAGCGGTAAGATCATTTGTTTCCTTGCTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | |||||||||