| mature miRNA: TTGGACTGAAGGGAGCTCCCA species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|219555201|gb|FG984902.1|FG984902 cB1_F11_R Grape berry-specific cDNA library Vitis vinifera cDNA, mRNA sequence TTGGACTGAAGGGAGCTCCCA EST sequence (targeted fragment marked with yellow): CCACCCACAGTGGATGTTCCTGAGGGTGCCCCCTTTAGTCCAATACCTTCTACAAGTCTTGCAGAAGTA | |||||||||
gi|110386565|gb|EC951167.1|EC951167 WIN0551.C21_N01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone TTGGACTGAAGGGAGCTCCCA EST sequence (targeted fragment marked with yellow): GCAAATGCAAGGTAGATATTCCTTATGAGAACAAAAAAAAGGTCCAACATCACAAAACATAATACAGGACAGATTTTAGCTAATCAAAACGATCTAGTCTATCCAAATTCCAGCCCACAGCATACAGTTTGCAACTCAGTAATGGTAAAGAAACACCAGAAATCAAAACATGAATCTTTAAGCATAAAGGCTAATAAGAGAGATTAAACTGAACTTGTATAAAAACTATGCCTGGAGGACATACCAAGAAAATTGACCCCATGCTATTAGGCACTGGAAGCTGCTTGGGCTGCGAGTCTCTTCTGGGCCTCCTCAATAATGGACAGCTTGATACCCTTGCCCTTGGGAAGAGTCACCCAGGGCTTTGTACCTTTGCCAATGATGAACACATTTCCCAAACGTGTTGCAAACTCATGCCCAGTGGCATCCTGGACATGGATGGTCTCAAAGCTGCCCTTACGTTTCTCCCTGTTCTTAATGACTCCGACACGTCCTCTGTTCCTTCCACCCGTCACCATGACAACATTCCCAACATCAAACTTTATGAAATCTGTGATCTTGTTGCTCTCCAAATCGAGCTTGATAGTGTCGTTGGCCTTAATCAGAGGATCAGGGTAGCGGATGGTTCGCCCATCATAAGTGTTGAGATATGGGATTCCCTTCTGTCCAAACTGCACAGACCTCACCTTGCAGAGCTTAAACTTAGCCTCTTCATCCCTAATTGAGTGGAGACGA | |||||||||
gi|110703205|gb|EE079845.1|EE079845 S2B23122 Buds (VvS2) Vitis vinifera cDNA clone S2B23122, mRNA sequence TTGGACTGAAGGGAGCTCCCA EST sequence (targeted fragment marked with yellow): CTGGTTTCTATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGTTGCCTCACCTTCAGAGGTTTTCTCCTATAGACGGATCAAATCTACCTTTCTTCATGGGCGCTGCTCCTGTGGAGAATCATCACCACCATCATCAATTTCCACCTGGATTTGATGGCCGCTTGCAACTCTACTATGGCGACGGAAGCAGGCATTCAGACCAGAAGGGAAAAGGAAAGAACTAAGTTGCTGGAAGAGCACATTCCTCTCGGTTCAACATCGTTTCTGGAAAAATGAAGATGGAGAAGTAGAGAGGGAAGCCGTGAGTGAATGCATGCCTTCCCCTGAAATTGTTATTATTTATGCTTTATGCGTTTTGAAATGGTTGAGCTTTCCATCCACACATTGGGGATATATTTGCTTTGCTTGTGCATGGGAAGCATTGTGTGTTTTGATGAGATGATTTGATTTGAAGTTATTCATCAATTTGCCTTTTGGAATTTGTCGATACTTATTATTTAAGAATCAATCTACTTAATGAAGCGGAATTGCATTT | |||||||||
gi|110428514|gb|EC994988.1|EC994988 WIN1151.C21_P02 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TTGGACTGAAGGGAGCTCCCA EST sequence (targeted fragment marked with yellow): GTTTTTTTCAAGTCTTTTTCATAATCATCAAACTTAACATCTGATCATGAGATGGGTTAAAATACAATATTCCTAACAAACAGCCTGTACTGAAAGGAAGAACGCGGTTACACTAAGAGCCGAGAAACCGATCACTCGAGCAAACACTAACGTTATCTGGTTTAACAATATCATTCATCTCCTAGCTAGATTCCCATATTCTAATCTCAACAAGCTTAATTTCTGAAAGCAAACATAATCGTGGGCCATGCAGGCATGCAAAAAAAATGGAAAAAAAATCACTGTTTCTCATAAGATATTCCATGTTTTCAACAAATTAAGCAACAGAAATTTGGAACTTACCCCTTAGATATATCCAATCCTCCAAGATAGCAAACACTCTCTAGGCATATATATATATATATATATACGTATATTGGTTAATAGTTTCCAGCCTTGAAAGCCATTAGAGAAGGAAAAGAGAAGAACTAGGAGCTCCCTTCAGTCCAAAACAAGGAGCATGAAGTTCATCATCTTCTTCAGCGATGGAGTTGTTTTGGGCTGCAAAGGAACCCCCATTTCTGCAGTTTTCTTGACAATTAAGCTCATGGAAAAAAGGAGAAAGATAGTGAGAGGAGAACA | |||||||||
gi|110362505|gb|EC926046.1|EC926046 WIN0210.TB24.1_O14 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA TTGGACTGAAGGGAGCTCCCA EST sequence (targeted fragment marked with yellow): CTTGTCAGGATTTGGTGGACAAATCCACTTGGGAAATTCACTGCCGCAATCGCCGTTCAATGTGGCTGGCGATCATCATCCGGAGCTGCAGCATTTTTCTTTTGTTCCCGACCATCTTATCCCGGTGGCGACTTCGCAACCCGGTGGTAGTGACAACAACCTCAACTTTACAATCTCTTCCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTGTGTTGCCTCACCTTCAGAGGTTTTCTCCTATAGACGGATCAAATCTACCTTTTTTCATGGGCGGTGCTCCTGTGGAGAATCATCACCACCATCATCAATTTCCACCTGGATTTGATGGCTGCTTGCAACTCTACTATGGCGACGGAAGCAGGCATTCAGACCAGAAGGGAAAAGGAAAGAACTAAGTTGCTGGAAGAGCACATTCCTCTCGGTTCAACATCGTTTCTGGAAAAATGAAGATGGAGAAGTAGAGAGGGAAGCCGTGAGTGAATGCATGCCTTCCCCTGAAATTGTTATTATTTATGCTTTATGCGTTTTGAAATGGTTGAGCTTTCCATCCCACACATTGGGGATATATTTGCTTTGCTTGTGCATGGGAAGCATTGTGTGTTTTGATGAGATGATTTGATTTGAAGTTATTCATCAATTTGCCTTTTGGAATTTGTCGATACTTATTATTTAAGAATCAATCTACTTAATGAAGCGGAA | |||||||||
gi|110424452|gb|EC990814.1|EC990814 WIN1140.C21_K16 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clo TTGGACTGAAGGGAGCTCCCA EST sequence (targeted fragment marked with yellow): TTGCTGGACAAATCCACTTGGGAAATTCACTGCCGCAATCGCCGTTCAATGTGGCTGGCGATCATCATCCGGAGCTGCAGCATTTTTCTTTTGTTCCCGACCATCTTATCCCGGTGGCGACTTCGCAACCCGGTGGTAGTGACAACAACCTCAACTTTACAATCTCTTCCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGTTGCCTCACCTTCAGAGGTTTTCTCCTATAGACGGATCAAATCTACCTTTCTTCATGGGCGCTGCTCCTGTGGAGAATCATCACCACCATCATCAATTTCCACCTGGATTTGATGGCTGCTTGCAACTCTACTATGGCGACGGAAGCAGGCATTCAGACCAGAAGGGAAAAGGAAAGAACTAAGTTGCTGGAAGAGCACATTCCTCTCGGTTCAACATCGTTTCTGGAAAAATGAAGATGGAGAAGTAGAGAGGGAAGCCGTGAGTGAATGCATGCCTTCCCCTGAAATTGTTATTATTTATGCTTTATGCGTTTTGAAATGGTTGAGCTTTCCATCCCACACATTGGGGATATATTTGCTTTGCTTGTGCATGGGAAGCATTGTGTGTTTTGATGAGATGATTTGATTTGAAGTTATTCATCAATTTGCCTTTGGAAAAAAAAAAAAAAAAAAA | |||||||||