miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: mirtrons
Degradomes


See miRNEST mirtron predictions



Field:Contains:


951 records found


#

species

Locus

Coordinates

Type

Status

Intron_length

5' sequence

3' sequence

Gene (intron #)

1Homo sapienshsa-mir-1178chr12:120151404-120151653-5p tailed mirtronreclassify548CAGGGTCAGCTGAGCATGTTGCTCACTGTTCTTCCCTAGCIT (24)
2Homo sapienshsa-mir-1224chr3:183959143-183959327+mirtronknown85GTGAGGACTCGGGAGGTGGAGGGTCCCCACCTCCTCTCTCCTCAGtVWA5B2 (18)
3Homo sapienshsa-mir-1225chr16:2140146-2140335-mirtron candidatecandidate90GTGGGTACGGCCCAGTGGGGCGGACTGACTGAGCCCCTGTGCCGCCCCCAGTPKD1 (45)
4Homo sapienshsa-mir-1226chr3:47890995-47891169+mirtronknown75GTGAGGGCATGCAGGCCTGGATGGGGTCACCAGCCCTGTGTTCCCTAGtDHX30 (21)
5Homo sapienshsa-mir-1227chr19:2234011-2234198-mirtronknown88GTGGGGCCAGGCGGTGGCGTGCCACCCTTTTCCCCAGaPLEKHJ1 (4)
6Homo sapienshsa-mir-1228chr12:57588237-57588409+mirtronknown73GTGGGCGGGGGCAGGTGTGTGTCACACCTGCCTCGCCCCCCALRP1 (49)
7Homo sapienshsa-mir-1229chr5:179225228-179225396-mirtronknown69GTGGGTAGGGTTTGGGGGAGAGCGCTCTCACCACTGCCCTCCCACAGMGAT4B (10)
8Homo sapienshsa-mir-1231chr1:201777689-201777880+3p tailed mirtron candidatecandidate92GTGTCTGGGCGGACAGCTGCAGGCTTGCTGTCTGTCCAGTCTGCNAV1 (18)
9Homo sapienshsa-mir-1233-1chr15:34674220-34674401-mirtronknown82AGTGGGAGGCCAGGGCACGGCATGAGCCCTGTCCTCCCGCAGtGOLGA8A (9)
10Homo sapienshsa-mir-1234chr8:145625426-145625609-5p tailed mirtronreclassify84GGGGGGGGGGGGGGGGGGCCGTCGGCCTGACCACCCACCCCACACPSF1 (9)
11Homo sapienshsa-mir-1236chr6:31924566-31924767-mirtronknown102TGAGTGACAGGGGAAATGGGGATCTTCCCCTTGTCTCTCCAGaRDBP (3)
12Homo sapienshsa-mir-1237chr11:64136024-64136225+5p tailed mirtronknown102CGGGGGCGGGGCCGAAGCGCGTCCTTCTGCTCCGTCCCCCAGtRPS6KA4 (11)
13Homo sapienshsa-mir-1238chr19:10662748-10662930+mirtronknown83GTGAGTGGGAGCCCCAGTGTGTGCTTCCTCGTCTGTCTGCCCCAGTATG4D (8)
14Homo sapienshsa-mir-1292chr20:2633260-2633537+5p tailed mirtronknown178TGGGAACGGGTTCCGGCAGACGCTGTCGCGCCCCGGCTCCCGTTCNOP56 (1)
15Homo sapienshsa-mir-1909chr19:1816104-1816273-3p tailed mirtronreclassify70GTGAGTGCCGGTGCCTGCCCTGCGCAGGGGCCGGGTGCTCACCGREXO1 (11)
16Homo sapienshsa-mir-1976chr1:26880693-26881136+5p tailed mirtronknown344GTGGCAGCAAGGAAGGCAGGGGTCCCCTCCTGCCCTCCTTGCTGTAGRPS6KA1 (7)
17Homo sapienshsa-mir-3064chr17:62496842-62497091-5p tailed mirtronreclassify1236TCTGGCTGTTGTGGTGTGCAATTTGCCACACTGCAACACCTTADDX5 (11)
18Homo sapienshsa-mir-3605chr1:33797956-33798205-5p tailed mirtronknown1685GATGAGGATGGATAGCAAGGAAGCCTCCGTGTTACCTGTCCTCTPHC2 (2)
19Homo sapienshsa-mir-3606chr2:189860218-189860467+5p tailed mirtronknown592TTAGTGAAGGCTATTTTAATTTAAAATTTCTTTCACTACTTAGaCOL3A1 (21)
20Homo sapienshsa-mir-3620chr1:228284914-228285092+5p tailed mirtronknown79GTGGGCTGGGCTGGGCTGGGCCTCACCCTGCATCCCGCACCCAGtARF1 (2)
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