Basic information from miRBase |
hairpin accession number: MI0000814 |
Located between position 79099683 and 79099749 on chromosome 17 strand - |
Overlapping with sense strand of AATK-002 (intron 6). |
(Ensemble: OTTHUMT00000256056) |
mature miRNAs for MI0000814: |
hsa-miR-338-5p (MIMAT0004701): AACAATATCCTGGTGCTGAGTG |
hsa-miR-338-3p (MIMAT0000763): TCCAGCATCAGTGATTTTGTTG |
You can find this miRNA in TARGETS:PICTAR-VERT: hsa-miR-338 (accession: hsa-miR-338) |
References | ||||||||||||||
[1]Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G, Proc Natl Acad Sci U S A. 101:360-365(2004)., "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" ![]() | ||||||||||||||
[2]Weber MJ, FEBS J. 272:59-73(2005)., "New human and mouse microRNA genes found by homology search" ![]() | ||||||||||||||
[3]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing" ![]() | ||||||||||||||
[4]Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer" ![]() |
PROMOTER INFORMATION | ||||||||||||||
249 | chr17, 76753311-76755359, - | promoter sequence | Marson et al. ![]() | ![]() | ![]() | |||||||||
1102 | chr17, 76714278-76719344, - | promoter sequence | UCSC | ![]() | ![]() | |||||||||
1309 | chr17, 76717284-76722283, - | promoter sequence | Ozsolak et al. (MALME) ![]() | ![]() | ![]() | |||||||||
1514 | chr17, 76717284-76722283, - | promoter sequence | Ozsolak et al. (UACC62) ![]() | ![]() | ![]() |
more data |
Expression data from PhenomiR |