miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0008298
Located between position 22151336 and 22151577 on chromosome 07 strand +
mature miRNAs for MI0008298:
         osa-miR812i (MIMAT0007849): AAGACGGATGATTAAAGTTGGACA

References
[1]Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C, Genome Res. 18:1456-1465(2008)., "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"




>promoter (3kb upstream pre-miRNA, by PMRD):
CAGCGTCAGGGAATTACTAACGAGTCTTCGTATTCATTTGTTAATTTTTTTGCAATTACTAATGATTCCATTTAATTTCC
GGTTACAGGTGTGACGGAGCTCGTGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCTTA
GGGTGAGATCTCAAGCTCTTTCTATATGTGGAAAGATCGCTTGCTCGGAGAAAACGCGAGACACGGCGGCGATCTATACA
GGTTCGGGCCGCTGCTCAGCGTAATACCCTACTCCTGTGTTTTTGTGGATTTGTGTATGGACAAGTTACAAAGGATTAAC
TCCCTTTCCCCTCAGCCTTCCAAAAGGGAAAAAGTCCCTTCTCTAAATGGGCAAGGTCCTCCTTTTATATCTCAAGGGGA
TACCACATGCCCCTTTCTCTTTCCAAACTGGACTGTTCTTTTTCTCTTTAATGGGCGGAGATCGGTACGGTTTCCATCCG
GGAGCCCTTCTGATGGGACAGCCCACACCTACCCCCACCTCCCCCGAAGACAGAGATGACGCGGGACCGTGGCTGTCTGT
CGATGACGCGACCAGTGCCAGACCGGTCATTCTTGTCCGCCACGCGTCAGCTTAACAACGTGCATGTTTGCCCTTCTTCG
TGTAACACCTTGCCTGTAATGGTTAGGATGAAGCCTGGTATAAATCTGACCAGGGCTAACGTGCCATCTCTAAGAGATAA
CACGCTAGCTCCGGCTTGAGACGAGTGCCTACAGACTTTTGTCTTGACGGGATGGGGCAAGGCGTGCGTCAGACCGCCAG
TCGCCACCTAACCCGTGATCTGACCGGTCTGTGACTGGTCACAGACCGGATAAAGGAACGCGCTGTACTGCGTTGCATGC
AGCATGACACGCTTGACCAGACTGCAATAAATGCTGTTAGGTGAGCACAGCTGTGCTCACTTATCCCATATATGTGGCGC
AGACTTCCTTAAGGGGTCGGGGTGCCTCGGCCCTCGGGGCCGGGGCAAGCGCAACCCGACCCCCCCTCGGGGGAAATCAG
GAGGAGGGCGGACACCTCACCCTCGGGCCCGACGTCCCCGAAGGTGCCAGGCCACGTGGGCGATTGCGTCTGCCTCAAGC
CTCTGGTCATGATACTCCCGGTCCCATATCACCGACAGTAGCCCCCGGCGTTATGCCAGAGCAATTTCCCTTCCCCAGGG
AAGCGGTCAGGTGTGACGCCACCCCTAAAGCCTGGTGACAGGTGGGACCGGTCTCCGTAGTTGGGCAAAATACCCAACGG
TCTCAATTCATGCACATTGATATTGGTAACTTTGGTTGTTCATAATGGGCGGTCTATTCAAGACTGCCACACCACTTGAG
CAGCGCGCGAATCTGGGTGAGCAGATTTGTCTCGCCCGGAGATACGGTAACGCCGCTTCGGTCGGCGAGCGTAATTAACG
CGCGCACGATACAATCCGTTTCGATTGCCACCAACGCATATCCACTTCATGCGCCGTAAGCGGGCGAATGGGATTAGTGG
AAGCGGGGGCACGGGAAACGAGGGAGCGAGATAACGAGATACGAGGGAGCGAGGTAGTGGGCGCGAGAAACGAGGAGCCA
GGCCCAGCGATGGCAAGGGTATAAAAGCATCGAGAAAAGGATTTGCTCCCTTCCTTTCGCCATTGTTCCTCTTGCCTTCG
CCGCCTGAGCTCTAACTCTTTCTCTGCTACGCCCTACTTTCGCCACACGCGCTCGTTCCCAATCATCTCTTCCTCCACCG
CCATGGCACGGGGCTCTGCTCTGCTCGACGGCAGTGTACTGCCGCCTTCCCGCATCGTGAACGAGAGGCACGCCGGACTG
CCGCGCCGCTTCATGCCGGAGTCCGCCACCGGTCGGGAGATAGTAATGCTGGGCGAGGGGCGCCCGGCACCAGACTACCC
GGGGCGGTCCATCTTCTTCCTCCCCTTCGCAATGGCTGGGCTGGTCCCGCCATTTTCTCATTTCTTCATGGATGTCCTGG
AGTTCTACGATCTCCAGATGGCGCACCTCACCCCCAATGCGGTGATGACATTGGCCATCTTCGCACACCTGTGCGAGATG
TTCATTGGGGTGCGCCCCTCTCTTCAGCTGTTCCGGTGGTTCTTCACCGTGCAGTCGGTGTCACCGCCGTCGGTGGTTGG
CGGCTGCTACTTCCAGCCGCGGGGGCCGGTGTTGAACCGCTACATCCCCTGCGTCCTCCGCAAGAAGTGGGACGACTGGA
AGAGCGACTGGTTCTACACCCCCCTCGCCAACGAAGCGCGCCTCCGACTTCCAAGCCAGCCCCCGGCGCAGGTCTCCAGC
TGGCGGGCGCCGGTAGATCTGGGGGAGGACTACGACGCCGTCCTCGACCGCCTGGCGGGCCTGCGATCCCAGGGGCTCAC
CGGGGCCATGGTGTACGGCGATTACCTCCGCCGTCGGATTGCGCCGCTCCAACGGCGCGCCCGGAGCGCCTGGGAGTACA
CTGGGCCTGAAGACTACATGCGGACCCACCAGGGAGCCAGATGGGATTGGGCTCCCGAGGACTTCAAGATCGTAGTCCAA
AGGGTGCTGAATCTTAGCTCCGCGGAGGCGTCTCGCCTTCCTCAGGAGATCCTCCCCCTCTGCATCGATCCCGACCGCGT
CTCCATTCTAACCATTATGTTGGGGGTCGGGGCCTCAGAGGAGAGAGCCCCTAAGGGCCACGACGGCGCGGGCGAGCGCC
GCCGGGGGGAACAATCTGCCCCAGGAGGGGGTCGTGCTTCTGGGCCCCGCGTCGGGGGCTCGGGGAGCAGCCGCCCTGCC
GACGCCCAGGGGAAGAGGAAGTTGGGAGGAACACCTCCCCCATCTCCTCCCCGAGGGGGCGGGGCGGCGCGTGCCAGCAG
TCGGCGCCCGGAGGGGGCCGCGCCGACGTCGCAGCCCGAGGGGGAGCGCAAGAAGAAACGGCTCCGCAAGACGGGGGAGA
CGGAACCATGCCGGGGAAACCTGATTTCCCCTCCAAAGTG