miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005244
Located between position 5425886 and 5425988 on chromosome 07 strand -
mature miRNAs for MI0005244:
         osa-miR815c (MIMAT0004060): AAGGGGATTGAGGAGATTGGG

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
GAGCTTCTGCAGCAGCAACATGATTGACACGGGCCTTTGGCGCAGGTGCGGTAGAGTTGCTCTGGGCAGGGACAACCTTC
ACGCGTCGGGGCTTCGGACACTTGTCAGCATAATGTCCTGGGTCTCCACAGTTGAAACACACCACGGGCTTGCTGCCTTG
CTCCCTCTTGGCAGGTTGTTGCTGTGCTGGAGCTGCAACAGGACGTGGAGCTTGATTGCGGATGTTGTTGCCAGCATTGT
TGTTGAAGAACTGACGCTGCGGACGAACAACAGACGAAGAACCTCCCTGTGGCATGGACTGGGGTCCTAAAGTAAGACGC
GGCTTCTGATTATTCCCCTGTTGTGTCTTGAATTGAGCAATCCGGCGTTTCTTCTGCTCCATGCGATTGTACTTGTCTTC
CTGACGAATAGCCTTATCCACTAACTTCTGGAAATCATGATAATCTCCAGTCATGAGTGGGTAAGAAAGCTCATCATTAA
GTCCTTCCAAGAACTTCTCCTGGCGCTCTTCATCATTGCGCACATCTTCCGGAGCATAACGAGCCAGACGATTGAACTCG
TGCAAATACTCCGTAACAGAGCGAGATCCCTGGGTGAGCGACCTGAATTCCTTCTTCTTGAGAGACACCACTCCCGATGG
TATATGCGTCTTCCGGAAAGCAGCGGTGAATTCAAGCCAAGTGATAGGTTCCGCAGTAGTCCTATTCAGGCGGAAATGAT
CCCACCATTCAGAGGCAGGGCCATGCAACTGAGGTGATGCAAATGAGACCTTCTCCTGATCAGTGCACTGAAGCAAATCC
AACTTCTTCTCTATGGCATGCAACCAATCACCAGCTTCAACAGGATTAGTGGTGCTAGAGAAAGTAGGCGGCCTTACACG
AAGAAATTCTGCTAACTTGTTCTGGGGAGGTGCATGGTTATTTCCTTGGTTTTGCTGGTTCTGGAGTTGCTGCATCATCA
TGTTCATTAGCTGTGTCTGTTGAGCAAGAACTTGGGCAAGTGTGGGATTCTCTCCATTGTTGTTGTTATTGGGGTTGTTG
GGGCCATTCCCATTGCTGCGAGTGTTCACCATCTGGTATGGGCAGGATCACAAGAAGAGAAACCGGGGAAAACTACTTAG
GACAGAGAATTACTTTAACTTTTATTGATCTTAAGTGAGTTTCATTATTACAAACTGAAGACTCTCACACCACTAAACTC
ACCAACTTCCTAACACTCAAAAGCAAACAAACGCATGCACTTACATCCCTCCACTGATGTAAATCACATGCAAGACCCAC
ACACACAACCAAACTTAAAACAAGCAAACTAACACAACGATCTAAGACAACGGTTAGACATGTCACTCTAGTTCTTCCGA
GCATCGGAGGTCAATTGAAGGCTCGTTCGGCTCGTCTTCATCATCTTGAGTTGCTACCCACTCAATCTTGGAATGGGTGC
GCTTGGATTCTTCTTCTTCATCATCACTTATATTGATGACCGGAGGATCCGCTAGAGCTGGGGTAACTTCTCTCTCCATC
ACACAAACCTTTGGCGCCAATTGATAGCGAGGGACAAATAGAGCTCTCTTCCTTGCGGTGAGACGAATCCTAGCCTTCTG
CGGTGGTGCTTCTCCCTTCAACGTAGCTAGCTCCTTCTCCAAACGATCCACCTTGTCTTCTAGCTTGCAAATCTTACCAC
GATTCCGGTCTTCACGATCTTGAGCCGCTAACACAGTCTCTGCACGACTTTCATCCATAGCCCACAGCATCTCAACCAAA
TGCCTTGTGGTAGCATCATTCTCAATTCCTTCAGTCTCAAGATAACTGCCACGGTCACTTCCCTGGGGTTGGCGAGGATG
ATAGCGATACTCCGTGTCGGCCAACTGATCACTGTAGCGATCACGGAGCTCTCCTATGGCGATCCTTGCCACCTCCTGAC
ATGCATGGATGTAGTTTCTTCCTCCAGCTTCGAACATCACTGAGGGGATATCTTCACTATTACTGTTCAAAGTGACTTTG
ACTCGGCACTTCTCTTCGTGACGATCATGAGGAATCTGGGCATAAAAAGGGGCAGTCCCAAATCCTATGGCAAAGGACAT
TGTACGCAACTCCTGGACAAAACCCTCAACACCAAACAGGTACTCAGGCTTGTAGCGCGGCATCTAAAGACAAGTGAAAG
GAGGGAGTTAAGATATTTATCCAATTAATAGCACAAGTTTTTGGATTAATTTGAATAAAGTTAGAAAATCAAAGTAAAAG
GTAAGTAAATAAAGTAAACCAAGCTTGCAAGATAAGTTGAAATAGTTGGAAACAAGGTTACAATTTTTGTACTTTTGAAC
AACAGGTTTCAAAAGAAATAAAAGAAAGTTATAAAATCGACATACTAAATTTATTTTATTGCAGCAAGATTAAATAAAAC
AACATTGTAAAACTTTTGCTGGTAAATGAGCCATTAGTACAGTAATAGATGTACAGTACTAATAACACTGGAATAAATTT
TGAATGAGAACCATTAAAAGAGATTATGAAGTGCATGTGCCATTAGTTTGGTTTAATTAAAAGAGAAAGGGAGGAGAACA
GTTCTACTTTTCCAATATTTTTAGAGGGCTTCTATGGATAACCATTTGGCATAACCTAGGGTCAAGGGGCTCTGATACCA
ACTTGTCACGCCCGGAATTTCTATTCAAAATTCTAAACGCTTACATGTGTGTGAACCCTCGTCCAGGAATCAGCCGAGGC
ACATAATAACAAATTGATAATAGAGTACAATTATTACTCTAATTAATAAGCAAATAAAATGTCATTACAGAGGTAGATAG
TTCCTCTCAATCAATAAAGATCTAAGCAGCGGAAAAATAAGATAAACGGCGCAGACGGCTCCACTCCACAGGCAGCTTGA
CCAGGGCTACACCTAATCCTCCACACCATCAGCTTCACTGTAGAACTCTTCCTCTGATGAATGATTGCAAGGTGAGTATA
TGACATACTCAGCAAGCCACGCAGCAAATATGCAAGTGTA