Basic information from miRBase |
hairpin accession number: MI0010549 |
Located between position 3960346 and 3960454 on chromosome 10 strand + |
mature miRNAs for MI0010549: |
osa-miR1428g-5p (MIMAT0010044): AATTCACAGGCCCTATCTTGTG |
References |
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CTGTGGGACGGTGGACTTCTGATGCATGCCTGTACTATGCCCCCGCATAATACGTTTGCATTTCTGTCGCATTCGGTCTA
GAGCAGACATCATCTCCTCGAGGGACCCAGCTATATTGTCACGCAGCTTCTCCCACAGTGAGGTTGTGTCAGAATATAGT
TCCTCCACAATATCGCCCTACGAAAATAAATGTTACAATGATTACAGGTTGCGGTAAGATTATTGTTTCATTAAAAATTT
AGTGGATAATATGTTACCGTCAGGTGGGTAACTGGCGCTGACTGCATAGGGTACAGCGTGTCCACGTTGGCTATTTCAGG
AATATCTGGATCCTCTATTGTCACAAGACGTACATGTGTTTGTGCGATGTACCACTTGGACATACCACTTGGACAGCTGG
AAGACATCAGCCGTGCACGGTGCCGTGCATCGATGCCGTGCACCGTGCATGGCTGATGTCTTCCAGAATCCTACCCGTTA
CTCAGTAGAGACATCGATGCATGGCACCATGCATGGCTAATGTCTTCCAGTCGTCCAAGTGGTATGTCGGTCTTCATAAC
GCGGACTTTCCCAATGTGGGGAGTCGACGAACGTTGGTTACCAAGGTAACTAATTTTTTTACACACTTACATGAATTTTT
GTTAATTTTTTTGCTGCAATTATTGTAAATTTTGTCTGACGCAACAACTCGTTATGCAAGGATGTCTTGTTGCAGGCATT
CTTCTTTTTGTTAGGATGTTGCAGGCTAGAGGGCATTACGATTACATGGTAGCAAGACAACAAAGTGCACGCCGACGGAA
AGCAAATAAAAGGGAAGACACTGACGAGGAAGATGAAGATGTGTCATCTAGAGACACACGCCGATAGATTATACACAAGG
GACTTCTAACTGCATTGGTCGACAGATGGAGGCCGGAGACTCACACTTTCCACCTCCCGTGTGGAGAGATGGCAATTACA
CTGCGAGATGTATCCATGCTTATAGGGCTACCACTTGCAGGACAGACAATTGTCCTCCCCGACCCACCTGTGGAATGGAG
GGATGATATTATTGGAAGATATGCTTACATTGTTCCAGAGGATGATAGAGACATGAAAGGACTTTTCTATAAAGATGAAG
CGCGCGGCCCTACGTTACACTGGCTCATCCAGTTCGAGGAAAAACTAATTCATACAAAAAACTTCCATTGATGATATTAT
GTTTTGTTATTGAAATTTTCTGTGTACCTTTGTAGGTTTCTTTCACGAGAGAGGACGTAGAAAATTACCATGTGGAATTG
CATTTGGAGGCTTACCTTCTATGGCTTTTTGGATGGGTTATGTTCACAAGTGGACACGGATACATAGTGGATGCGAGAAT
GATTTCCATAGCAAGATTTATTGTGCAGGGCAACATAGAAAGTTTTCCCTAGTGGAGTTGGGGATCAGCAGTTTTGGCTA
CAACTTACCGAGATCTATGTGAAGCATGCACAAAGACAAGCTTTAAGCAACCTATGTTTACTGGTTGTCCGTTGTTGTTC
ATGCTATGGTCTTAAGAACGCTTCCCATTGGGACGACCATACGTGCCTGGAACTGTGGCATATTCTAGCTTATTTGGTAA
CACTACAGATGATAGGCCTACTTATGGCATGCGTTGGTGCTAGGGACCGGTACGTAGAAATTTTTTTTTGTACATTTGCA
TTTAGTTCGTACAGCTATAATCTTACTATTTATTTAATAACATGCAACCACAGTGGACGAACGTTCAGGCTCGAAGCGTG
TACGAGTACTTCACTGAGGCGTTCGATCTACTTAAGGAGGATACGTTCAGTGGTGTCCATACACGGAAGAGGAGACACAA
CGTCGTGCCCCTGCCGACCTCAGTATACTCTACTTGCGTGACTCGTCTTACTGGCTGATGAAAAAGATGCTTGTCTACGA
TATAGCCGTTGAGGCGTACAATCTACAGCGTGTAATGAGGCAATTCAGCCTTTACCAAGAAGTGCCTCTCCTGCTTGGTG
AAACAGTCCCCCCCTCCAAAAAAATACACTTATAAGTTAAATTCAATTGGATTCCCATTAATTACCGTGTGTCCGAATTA
TACTACTTAACTCAACACCTAATGATGAGTTTTTTTGTTAGAAAAGAGGAAGGGAGATGCTAGCGTGTGGCGAAATATCG
TTGGTAAGATGACCCCTTGGGTCGAACAATGTTCGAGGGCAACATTCGATATATTAACGAATCCAGACCGTACGACCGTC
GTATGTACGCGTTGTACATGCGGTGGTACATCGCATAAACACGCGTATGCCTTGTGACAATAGAGGATCCATATATTCCT
GAAATAGCCGACGTGGACACGCTGTACCCTATGCAGTCAGCGCCAGTTACCCACCTGACGGTAACATATTATCCACTAAA
TTTTTAATGAAACAATAATCTTACCGCAACCTGTAATCATTGTAACATTTATTTTCGTAGGGCGATATTGCGGAGGAACT
ATATTCTGACACAACCTCACTGTGGGAGAAGCTGCGTGACAATATAGCTGGGTCCCTTGAGGAGATGATGTCTGCTCTGG
ACCGAATGCGACAGAAATGCAAACGTATTATGCGGGGGGCATCGTGCAGGCGTGCATCAGAAGTCCACCGTCCCACAGGA
CACAGGTTTGCGGACCCCCTACTGGAACAACCGTCTACCTCTTCTACCTCTTCTAGGCCTTCGACATAGGCAAGACCCTC
AGCTTCCACACGTCCTAGGTCGTCGGCAAGGCCTGTGGCACCGTCTACGATAAACTGACCGGACAATGCAGGTAAAGCCT
ATTATGATACAAATAGTTTTCGAGCATACTACTTGTTAACTTGTTAGCATGCAGTTGGTTAGGCCTATACCAACAACAAA
AGGAGGATCACAGTGGCATCAAGGGTTTACATCGGTACCGGTAGAAACTGTTTCACAAAATATTTTTGTATGGATGACTT
GTTAACTTCTCTAGTACTATTGTATATAGTATAGCATTCA