miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001075
Located between position 20632514 and 20632637 on chromosome 5 strand +
mature miRNAs for MI0001075:
         ath-miR405b (MIMAT0001007): ATGAGTTGGGTCTAACCCATAACT

References
[1]Sunkar R, Zhu JK, Plant Cell. 16:2001-2019(2004)., "Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis"




>promoter (3kb upstream pre-miRNA, by PMRD):
GTTTTAGTTAAAAAAAACACATAAACGGGGAGACTCAAGTATCGATATTCCTAATAATGAGGAAAAGAGAAGAAAGAATT
AAAGGCATGGGCTACATCAAGGATCTTGTTGCTAAGAGCCTCCATCATTGGAAATTTTGGTCTGGCTATCAGCAGCCACC
GGGCTACCCACTCTGTTGCCTCAGAACAAAAAACCTTCAACAATATGACACAACCTATCCAGTCGGGTTCCAACAAGTAC
CTATCTCCTCTACATACGCTCCGCATTATTGCTTTCGCACACCTCTCGGCTGATTCTACTGGCAATACGCTCATTTGCAC
CTGATTCATATATATTCATTCTCTTAATTTTACATAGCAACTAGTTGTTCATGGTAACTACAACCGATGAAATTTGAATC
CCAGCGTAAATGTAAAAAAAAATTGGGTCCTCAATCGAACAAAAATGAGTGACTATAGCTGGATTTCATCAAAAAGTTAC
CATTGACGCTGGCAATATCTTACTAGTAAATTTATATTTAAGTTAATTAATCTAACATGAACTTATCATTCATTATATTT
ATCTTATATTACTCCAAATAACCATTAGTTATAGCCATATTTTCTTAACCATTCAAGAACAATAAAGATTCCCGGGATTC
TTACATCTCTGAGCTCTTTATCGACGACAAGTTTACCGTCCTTTGTCATGAACTTGCCTCGGCTCATTTCCGAATCGACG
ATCCCCGGTGCTACAATGGTAACCCCAATATCTGATCCAAACTCAGTTCTTAGTGTTTCATAAAAGGCGATCACAGCAGC
TTTACTCGCCTGAATTCATCGGCATGAAATGAAGGTACAAAAATGAATGCTTGAGATCAGATGGTTAGTAAATTAGGAGA
GGGAAATGGATACAAAATATAATGTTACACAGTAAAAGCTTAGTCTAGGTGAAGCAATGTATCCACATCCAGAAGCAATC
ACCACAATCCTTCCTCTAAACTTCTTTAGGTATGGAGAAGCAAAAAATGTGCAATACACAGATCCCCAAAAGTTGATGTC
CTATGCAAAGAAAAACAAAACTTATCACAAACGGTTAGTACAAAACTATTTTTTTAGAGAGATCTTTGGTCGGAGTAACT
TGACCATAGCCGGCGAAGCCTTAGAGACATCTTCGATGTCTGCAAAAAAATAGAGTGGAGCAACTCCTGCATTTGTCACT
AGATGATCCACTGCCCAAATTAGAAACATAAACAAAATAAGAAAAATTAAAATCAGCAATACTATTTTAGTTTACTCATA
TTATCCTCCATAATTTTTGAATTGTCCTACCTAATTATGTTGCGATTGATTTAGACGCCAATTTCTATATTTGTGTTTAC
AAATGAAAAAAAAAAAAAAAATACCTACTAGAGCCTAGGTCATAGTTTCAATTGCAAAAAAGCAAAAAAAAAATACATTA
TCTGATAAATTGTCATGCAAACAAACTACATTTAGAACGTAATTTAGTAATTATACTTATTGACTTACATCGTCCAAAAT
GAAGAACCGTGGCTCGGATAAAACGCTCGCAGTCTTGGAGTTTGGAAACATCGGCTACTAAGGGCAAGACTTCAGGGGAG
CCATAGAGCTCAGCGAGAGCCGCTACATGGAAGAGAGGTTCTCCTCTTATGTCAACAAGTGCTAAATACGCTCCCCTCTT
CCCGTACTCATACGCTAAAGCCTATACACACACTATCACACCCACTTTTACATAACCCTAATCATCATTTTTGTTTGTTT
GTTTGTTGACTTACCTCGCCGATGCCAGAAGCTGCTCCGGTGATGACAACAACTTTTCCGGCGACATTTTCCGAGAACAG
ATTCCGGCAGATGGAGACGGCGGATTTGAGCCTCTGGTAAGTTGGGTAGAAGACAAGAAGTGCATACAAGGTTAAGAGAG
GAAACAAGAAGTTGATGATCTTGTTGATTGAATCCATGCATCAAGGACTATACTTCACAATGGTTTTTCAGTTTTCCTTG
TTCTCTCCGCTTTCGGAGTTTTTTGTTTTGCTTTATTCTGGTGGAAGCTTCTCATGATAATGTATGTGGCAATCCTACAA
GCTGATATGCCCACACGTGTTTGCACAATCTACAAACCTCAATTATATAGTGTTTTTGTTATGGACGATATATACTTGGG
TTCACCATAGTATTAAACCCTTTTATTCACCCGTCTCTTTTTCTATCTAATCAAAATAAACCAATATGCTATGTCATATA
GTCATATACTCATATTATATGTTTAAAAATAAATCAAAACTAAAAAAAAAAAAAAGCAAAATAAATTATGAAAATAAAAT
ATGTATTTTTAATTAAAGAAAATTAAATATTACTTTATGTTTATAAATAAGAATTTAAGTTAGTATTTACAATCATTTAA
TTATATTTAATTATAAATCTAATCACATTAATAAAATAAAATGAAATTCCTTCAAATAGTACAATTTTAAGTTTTTAAGA
CAAAAATAGCATTCATATTTTTTTTTGACATAAATAACATTCAGATAACTATTTTATTTTATTATTAAAATTAACAATTA
AAAAAATACACATATTCATTACCAAAAATTCCTGACAATTTTTTCCGCCAAAATAAGTTTTCGTCAAAAAATTTCCCGTA
AAAAATATATGCCCCTATTTTCTCGCAAAAGAAAATCCAGGAAGAATTTTACAAAATTTAGGAAGGAATGTAAGCAATTA
CGAAGGATTTCATGAAATTCAAAAATTTCTTTTTGTTGTGTATAACTCTTCATAAATTTTATGATATCTTTCCTGAATTT
TATAGATTCTTTCCGAAATTTCGTAAAATCATTCAAATAATAATTTTCTAAAATTTAGAAAGGATTTTACGAAATTCAGG
AAAGATTTCACGAATTGTTTTTTGTGAAATCCTTTCTGAGTTTTGCAATTATCTTCTTAAAAACCACATTTCTTCAAATC
AAACTATTTACATTTCTAAGAGTGCTCATGAATTTTCTCA