miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005216
Located between position 22846562 and 22846801 on chromosome 10 strand +
mature miRNAs for MI0005216:
         osa-miR806g (MIMAT0004032): ATGTGCTAAAAAGTCAACGGTG

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
ATTTCAAGGCGATTTCTTTTATCCAATTTAGTGCCTTTCATTACAAATTGATAAAGGACAAACATATACTTTTGACTTTT
CCAATACATTTAAGTCAGTAGGCATATAAGTCTAAAACTGCACTCCAAGCATCAAATTTGGATGGAAGTACAAGTTAATG
AGGCAATGACAACGCAGTCTACCAATGGCATGACCTCTAGTAAGGCCGTTACAGTAGGAACTACTGCCACAGTAAAGATC
AAACAATCACGTGCTGCTTTGAAGCTTTCACACATTAACATAGGCATGCCATTAGGAAGGTTCTTGGGTTTTGAAAGCTG
ACAGCTTGGAAGACTTTTCTTGGACCAACACCGCGAATATAACTACGCAGTAAACTAGAAATCATTCTGAATCAGAACAG
AGCTAACAACACCGTACGCAATCATAGGTTCCAATCTCCGATGATCGGGTGTCTAAACATGAGAACACTGAGCCTAGTTA
CCAGCCACTCACAAAATCCCTAATTCGACACTGTTATCCTCTCAGAACACGTGGCCCCATGCATCCTTGCAGAGGCAAAG
GATCAAATTAAAAAGTTCCACAGGATCAGCCATCATTACTCGTTGGAACGATCTGGTCTGATTCTAAATTCTTACTTATC
CTAGACAAATATGGAGCTGAGCATGAGTTTGACAAAACGTCCTTGTGATCTCATCAAACAGTTGGAGGCATCTATACGCC
GTCCTTGTACCGAGAGTAATTAATTGAAGTGGAGTGGCGTATGCATGAGCTAAGTAGTACCAAATCACTCATCCATGACC
ATCAGTACAATCTGCCCATTAAATGCTTTCTCTAGCGTCTGTCCTACTTGGAAGAAACAACTAGCAGTGACTGCTAGTAG
CAGTACTCCATCAAATCTCCCAAATCTACACGCCGAAGCAGCAAAGGAAGAAGAACATACTAGTAGGAATAATAATAAAA
AAAGAAGCACAAGAAGAAGAAAAACCTGAGGTTGGAGAGGATCTAGTAAGTCGCATCAGGCCAGAATGGTTTTTGGGATG
ATTAAATCATTGAAATTAAGGGGTTGGGAAAGAAGAAGAAGGGGGGGGGCTGACCCTTCTTGCGGTCGCGGGTGGCGGAG
GAGGAGCCCTGGACGAAGTCGTCGGAGGCGTAGCCGTCGGCGGCGGTGGGGGCGGCGTCGGGGCCGTCGGCGGGGGAGGC
GCCGCCGCTGGTGGATCCGGCGGCGGAGGAGAGGAGGGAGAGGTTCCCCATGCTGGCGCTCTTGCGGATGGAGCCATCGG
TGAGGCGCACCCCGAAGATCTTGACCCCGCGGTTGGGGCACGTCCGCGAGTTGTGCCCGTTGTGGCTGCAGTGCGAGCAC
CGCCTCGTCATCCCCCCCTCCGTCCCTCCACCTTCCAAAGCTTCCCTTCCCCCACCTATGGAGATCGATCGATCGATCGA
GTGGAGACGGAGATGGTGGTGGTGGAGACGACGAGGAGAGGGAGGGGGGAGAAGAGGAAGGGGAGGAGAGGGGTTAACTG
CTGTGTGGTGATTGGTTAAGGTGGTCGGAGAGAGGCGAGGGCCGTCCACGTGGCGGATATTCGGGGGAAGGGGATATACG
TGAGACGAGGGAGGCAAGTAGCGGCGGCTTGTGGGTCACGCCTTCTTTCTATCCGTCCACGCGGTTGGGCTTCCTTCCTT
CGGCTGCTCTCCTCAGCCTCAGCCTCTGCTTCGATCGTTTCGTGTGGTGACTGGTGAACGATCCACAGCAAACGGCCCCC
AACAAACTCTCTCTCGCTGCTAGCTCGTCAAACTGTCGTGGTCTTTCTTTCTTTTCTTGTTTTTTTTCTTTTGAGCGATG
TCATGGTCTGGTTTAACTCTTCTACTCGTAACTAAACAGACGTTAACTAAAGATGAAAAATGCACGGATTATTCTACGCC
AAAAAGTTTATGGATTCTAAATGTGTTGCTTCTTGGTGTACCATGTAACCCTAATGTGCCACGGGTGAACGTAAATCCTG
AATAGTTGAGGATTAGAGGTTTGTCTCACTATAACTATCAATACCAGGTTTTGGTTGATTTTATCAGCTAAATGCCAGCT
AGATAAGGAAGATAAATCACACGTATCTGATTCCTAAAGACGGAGAGTTAGTTTTGTGAACAGTAGAACTAATTCCTAAC
CAAATTGGAGATAACCCTCGAGCCCCACCAGCGCCTATATAAAGAGATGAAAGGCAAAGGAGAAGGGATGTCGTACTCTT
TGCCTAAACCCTAAAACTTGCACTAGAAAGGATTCGTGAGGTGATCTCGGGAAGCCCTCGGTGATGAAAAAAGAAGAGAA
GAAAAGAAACCGAAGAAGAAGAGAAGGAAGAAACAAAAGGAGAAAATTAACACCAATGGCATCTCAAGCAGGTCGGTGAG
ATTACAATTCTACATAGGTGATTTTGTATAGGCTAAAGCATTGAGATTGTAAATTTGAACTCCAACACGAGGATGTCAAA
TATTTTTGTAGAACGCTCACTTTGTTTCACATTAGAAGACAATAATGCTAATGACATTTTTACCTATCGATCCTATTGGA
GAGACAATATTAATATGATGGTGGAGTCCATCCACGAGGTCCATAAATATGCGTCTTTATAGTAGATGTTGAGTCTAAAG
ATTATACAACCTTTATCAAGTTAGTGTCATGTGGTATGCTATGATTCGTTTATATATGCATCAACCTATACTCTATATAA
GGAATTATGCTTCCTATAGAGTAAGGGAAAGGAATTATTGATGCTATTTGAATGTGTATTACGAGGACACGCTGATAGCT
ATGTACGTGTATGTATTTCATGGGACCTAAAATGTGCACTCACTCTTTCTGCAAGCATAAATCGAGGCTTGTTCAGTTTG
CTATCATTTTCAACCTTATCAAGTTTTGGCAAAGTTACTTAAAAAAGTAGCTACATTTAGTTTGTTGCCAAATTTTAGTA
AGTACATATAAAATCTTGTCAAAATTTGACAACCTTGCTA