Basic information from miRBase |
hairpin accession number: MI0001095 |
Located between position 6562756 and 6562944 on chromosome 01 strand - |
mature miRNAs for MI0001095: |
osa-miR159d (MIMAT0001025): ATTGGATTGAAGGGAGCTCCG |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TAGAGCAGGTTGATGCCAATGGATTCATTGAGATTGCAAAGCATATCTATGTATTTGGGATTACCAATCGAAAATATCTT
GGGAGTAATTCAAAGTACACGTAAATATGTAATGTATCTACCAAGTATATGCACGCAGATTATCTGGAAATGTCTCACCA
TTTGGTGGGTATCTGTTTCCATTTTCGTATGTGCATGCCTCCGAAACATCACTTCAGTATACAAATAAAGAACTGTGAAT
CAAGCACAACTAGGTATAGTGGAAATAACTGATTGGATATGGAAATTAAACTTCACAGCAATGTCAACAAATATTGTGAG
AAGCACCTCGATCTAAAAAGGAAACAAATTTGTATTGCAAGATTTCGAATATAAATACTATGAGTTACAGGGAATTTTCT
TGCCAAATATACTCATGCCAAGTTATATATCACCATAATTACACAGATTCACCAATATACTTTATATCACTTTCCAAAAG
CCGAATCCGGCTGTTCAATTGATGTATAAATAACTACTATAAGAGATTTGCAAATTGCAAAAGTATTTCAATTAGCAACG
AGGCCTGCCTTTCTCTGTCCATATATGTGAGGACCAAGTGTCTGATCCGACGGCCAAGATTTGCCCCTGAGTTCTATATA
AACCCACCAACCCCTAAGCAATCGTTGTACTCAGAACTCATGCGTTCCTAGGCTAGGTAGAAACTCATAATAGCACACAA
GGATTTTGATTTAGCAAGCTGTGTCACCTTTTCTGTTCATATACTTTTGTCTGTTTTTGTTGTGTTTGATACATAGGTTG
AAGAAAGATGGATATCTTGCTGTGATGTGAGGAGGAGCTCCTTTCGATCCAATTCAGGAGAGGAAGTGGTGGGATGCAGC
TGCCGGTTCATGGATACCTCTGCAGTTCATGCCGGTAGGCCTGCACTTGCATGGGTTTGCATGACCTGGGAGATGAACCT
GCCATTGTGTTCCTCTATTGATTGGATTGAAGGGAGCTCCGGCTACACCTATCTCTCTCACACACATATTATCATCATGG
TATGTATATTATAAGTTTGCAGCTTGTTCTCAATTAATTTTGGGTTTTCATCACTGCAGAAGTAAATGGTGACAGGAGTG
CAGAAGATGAGAAGAAGAGATATTGTCGGAGGACCGGAACCGGAGACAGATTGATCAGATTAAGTAGCAAATTAGACTAT
TGTGTATACTGTATTGTTTCTTTTTCTTTCTTCATCCGTGTCAAGAAACCATCAGCCATGTATAACGACATGTTTCGTTC
TGGTTAATTTTCTGCAGTAATGAATTATTTCTCATCTTCTTTTTAAGCTTTGGTATCACTCTGTGTATGTACATTTTGTT
GTTGGGAAAAAAAAGGTTACTGGAAATATACAACTTGAGAGATAAAGCGATAAAACCAGAAATAGGCATGAAATTAGCTA
GTCACGCATATGTAATATCTAATACTCCCTCCGTTTCGAAATGTTTGACACCATTTAACTTTTCAGCAAATGTTTGACCG
TTCGTTTTATTCAAAAAATTTTGTGAAATATGTAAAAGTATATGCCTACATAAAAATATATTTAACAATGAATCAAATGA
TAGAAAAAGAATTAATAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAACGGCGTCAA
ACATTTCGAAACGGAGGGAGGGAGTATGTAATAGGTAATGTACTTTCTTAAGGAAAAATAAAAGAGAACATGATAAGCAT
CTTTAGGAAAAAAGAAAACAGACTGTCACATTGACTTGCCATTGTTTATCTTGCGTAACGCACACTCGAAGCCAAGAATC
TTGGTCACCGACTACAGGCTCATCTGAAATTAATTTAACGTGCAACAGCCACTGGTAAGATTGTTAGGTTTACATGTTAA
GGTATGTGAAGGGGGAAACTATTTTGATCCCTCCAGAGATGTCCTCTTGTTTGCTTAAAAATAATCTAAATGGTTACGAA
AAATTATGGAAACACTCATACAACCTAACTATACAACTCCACAATCTTAAGTCCAAACTCAACTCACACGTCGAGATATA
AAAAAGACAAATTCAGTGTATAAATAGTAGCGTGTTGTTTATATCTGAATTTGTCTCTTTTGTTTCTTGATGTGTAGGTC
GAATTTAAACTTGATTTTTGGTGGACTCCTAGATATCACTATACTCTACATTGTCAATTTTTTTTCAGAATTTTTCACAA
CTATTCATATCAAATTTGAAAGAAAAAGATACACTCAAGAGAAGTGATTAGAATCCACTCCCTTATGTGAAGTGATGTGG
CCAGTTAAAATTTCAGCCATCCTCCATGTCCATGTAAGGTATGTACTGGTTAGTGTTTGGAATAATATATGTGGGCTATC
ATCCGGTCACAGTTTGGTGGCGGTGTCAGAGGATTAATTTAGATTGCAAAGCATATGAATTTGGATTTACAAATCGAAAA
GATCTTGGTAGTTAAAGTACATGTACCTACCAAGTATATAGGCACGCGGATTATCTGCAAGTGTCTCACCATTTGGTGGG
AATATGTTCCCATTTGCAAAGACAAGTCCATTTGCTTATATGCATGCCTCGCAGCAATAACTAGGTACTGTATAATGGAA
ATCACTGAATGGATATGGAAACTTCACGGCAATGTTAACAAATATTGTGAGAATCGTCTCTAAAAAGACATATTTTATAT
GGCAAGATTTCGAACATATAATACAAAAGGTTAAGGAATCATCGATCTTTGCAAATATACTCATGCCAAGTTATATCACC
ATAATTACACAGACTTACTAATATCCTCATGCCAAGACACCACTTTCCAAAAATTGCTGTATAAAGAACTATAAGAGATT
TGCAAAAATATTTCAATGTGCAACAAGGCTTGCCGCCAGCCTCACTTGCCATTCATGCATGATGCATACCAAAGTAAACA
TAACAAGGGCCAAGGGGAAAAAAAGGCAAGGTAAAAACAA