miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001117
Located between position 27294911 and 27295038 on chromosome 06 strand -
mature miRNAs for MI0001117:
         osa-miR169b (MIMAT0001047): CAGCCAAGGATGACTTGCCGG

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
ATCGTTCCAATTTCAACCAAAATTTCAATTTTAGCGTGAACTAAACACACTCTTAGTTAAAGTTATACTTTCTTTTCCAA
GAAAAAAAGAGCATGGTCAGGTGCAAATCATTGTGAACGTTGAATTCAACTGTTCACTGATTCCAACTGCAGATGTGAAC
GTGTCGCTTGATCTAATATAGTAGGAGGGGGAAAAAAGAGGAAAACTTGTATTTGCGCTAAAAGGAAAGAAAAAAAATGA
TGTTGATTAAGGCAAATCTCCGATGTAGCCTCCATATCCATATCCTGGCTACTGACGGTCAAGTGAACTGTGAGCTTACT
GCATCACTCTCAAAAAGACAAAAAGAAAAACGAGCCAAGGCCCATATCCACTCAACCGGGTGAAGGCCAAAAATGGAAAT
GAACAAGTTTACTGTACATCCCTCATTTGCCGTCGAGTTTGCAATTCATCCCTGCAACGCAATACCAAATAGAATGTGTC
CCTCAACTTCTAAAACCAGTGCAAATACGATCCGAAGATGGTTTTGATGATGGTTTCAGCTGACGTGACAACTACGTGGT
GTTGACGTGGCACTTAAAGTCAGAAAAAAAATCCGTGAGGCAACATGTAAGCACCCCTTCTCTTTCCCCTTTCTTCTCTC
TTCTGGTCTTCCCTTTCTTCTCATCGCACGAACGCCCACTTGGACCCTATCCGTCGTTCGTGCGGTGAGAAGAAAGGTAA
AACCAGGAGGGAGAAGAAAGGGAAAGAGAAGGGGTGGTTAGTAGGGCTGTCAACGAGCCGAGCTTGAGCGAGCTCGCTTG
CCTAGGCTCGAGCTCAATACAAGCTAGAGCCGAGCCTATAAAATGTTCGAGCTTTTAAACAGGCTCGGTTCGAGCTAGAT
CAAGCTCGAGCTCGACTACCGAGCTTGATTTTTAATTAGAACAATGTATATTTTAAAGAATATTCTTTTAAAAATAATTA
ATTTATGGTTTATCATATTAGTAGAAGAGGAAAAGGAATAAAATAAATATATGATGCCAATACAAGGCATACAAATAACA
TATTTCATCTACCAATTTATTAAATAGCAATAAAAAATCATATATTACTAGGCTTATTAGAAGCTCGAGCTCGGCTCGAC
AAAGCTCGCGAGCTTTGGGACAGGCTCAGGCTCGGCTCGTTTGGAGCTCGAGCCGAGCTCAAATCGAGCATAGGACGAGT
CGAGCTCGAGCAGCTCGCGAGCCTCGAGCTTTTTTTAACAGCCCTAGTAGTTAGATGTGGTCCCACGATATTTTTCTTAC
TTTAAGTGTCACATCAGCTGAAACCACCGTCCAAATGGCCTTAAGATCTTGTTTGCACATTGGTTTTAAGAGTTAAGAAA
CACATTATATCTGGTATTGCGATGCAGGGACTGATTTCAGATTCGGCGATAAATTGAGAGATCTAAAGTGAACTTATATT
CCAAACGAAAAAGGGAACAACTTAAGGCCGTCATAGCACACCAGGCCTATGAAGAAGGCATGCATGTTATGTGGGCCATG
TAAGCGACGGGATACAGATTCATGGTCCGGCCCATTTACACCCCGCCTAGGCTGATTGGCATTTCAGTCCAAGTATACTA
ATCCCCTCCCAACCCCTCTCTCCCGTTTTCCGCGTACACGCTTTTTTAATTGTTAAACGGTACTCTCTCCGACCCCCTAA
TATAAGAGATTTTGACATTTTGTTTGCACTGTTTGATCACTCGTCTTATTCAAAAAAATTGTGCAAATATAAAAAATAAA
AAGTTGTGCTTAAAGTACTTTAGACAATAAAATAAGTCAAAAAAATAAATAATAATTCTAAAATTTTTCGAATAAGACGA
ATGGTTAAACAGTGCAAGCAAAATGTCCCTTATATTAAGGGATGGAGGGAGTAAGTTTTTTTTGCAAAAAAAATTCTATA
TGAAAGTTGCTTAAAACAATCAAACTAATCCTTTTTAAAAAAAATAGCTAATACTTAATTAAGCACGTGTTAATGGACCG
CTCCGTTTTCTGTGCAGACTGTTCCAAGTTCCCAACCGGGAATAGCGAACACAGCCTAAAGCCTAAATGGTATTAACATG
GAAGCTTTAGGCGTTCGTGAAATTTGTTTAAAAAAAGTACATGCCCGAAATACTGATAAAGATGGTTTTTCTTTAAAAAT
ATGCTTGGAATTGTACCCATGATAATCCATACTCCCTTCGTTCCACTCCATGCATGCTGCAAATCATTCTAGTTGTCATA
ACTTAAACTTCTTTAGCTACGACTGAGTTTAGAGAAAAAATACAGTGACATCTACAATAACAAATAAATACACTATCAAG
TTAGAAATTTGTAAGGTGTGTTTAATAAAAAAATTCTTCATTAAACTCGATCGAAGTTAGAAATTTATAACTTATGAAAA
AAACTAAAATGACTTCCAATGTGAAATGGAGGGGTAGATTCTAATTTAGTAACAATGTGCCGCTCCTTTCACAGTGTGAA
ATTCACACTAGATATAATAAAAATAATGGCTTCGTTGTCTCGTAACTAATTATTAGATTTGTTTTTTCCAATAATAGTGT
CACGTTCTTACGATATCATAAGTGAAGATCACAAAGTGTAGGTGTCCTATAGTAAATTTTATTTGCTAAGATTGTAATCT
ACTGATAGTGTACCCTTAGGCTCATTTGAAACAAAGTAATTTTGTGATTGGATTCGAAGAACTTTTTTATGGTCCTTTGA
ACAAAGGAATGTCTCTCTCAAATTTATTTGAAAATTCTTAGGTTTCATAAATCAATACAATCTTTTAGAGGGAAAATCCT
TTATGTAATCTCTTTTTTTCTTATATTCATATATATTCCCTCGCTCCATCTAGATCCTATTATTTTCATGTATTTTTATA
TCCATAGGATTTCAAGTGACAAGGCACCCGAATCATATGTTTTCTCTGCATGTTTGCAAATCAAAAGTCTTCCGCTACCA
ACTGTTACGGTATACCCCCTCCGTCCCATTTTAAGTGCAA