miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001118
Located between position 30527213 and 30527324 on chromosome 04 strand -
mature miRNAs for MI0001118:
         osa-miR169c (MIMAT0001048): CAGCCAAGGATGACTTGCCGG

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
CTTCCCCTCCGCCGGATCCAGCGGGAGGGGAGGCTCCCCCTCCCCCACCGGCGGCGGAGCCGTTCCCCCTCCTGCGGTGG
CGGGCAGGGACGGTGCCCTCCCCTCCTCCGGATCTAGCGGGAGGGGAGGCAGCAGCGGCCCGGCGTCCCTACGACGACGG
CGGTGACGGCGGCACCCTCCCCTTCCAGCGTCGGTGTTTTTGTGCTTGTGATGTTCCTGTGTTGTCGTTGTTGTTGATGA
AATATGTTCTTGTGATCTTGTAGTAGTGTTTTCTCTAGGATTTTGTGATGATTCCAATTTGTATTTGGATTGAGATTAAG
ATTTTGTTTTTGGATTGGATTGGAATTGGATGTGGGATTTGGAGAGGAGGTGCGCGTGGGGTTATGGAGGGACGAAAAAT
CGGTGTGACGACCGGAAAAATCCAAATATTTCATACTCATTTGATTTGGGTATATACTCAATTTGAACAATGGTGCCCGG
GCACCATGGAGCATCAAACTAAATTACTTTTGCTCCATGGTGCCCGGGCACCATTGTTGAAATTGAGTATATAACCAATT
CAAATGAGTATGAAACTTTTTCAATTACTTAGGTATTAACATTAACTACTTTACTAACTAGTTCAAAGCAAGTTTGAACT
GAATTTGAACTTGTTTTTGTTAGATTTTAATTCTAGGTATATAGCATCCATATATATAATTAGTTAGGTATGTAATCATG
GATTGTGAAATAAAGTTAAATTTGAGTTGTTTTGTTGATAGGTATAGATATGAATCGAATTATTATAACTAGGTATATAC
TCACAATTTAAAAAATTTGAAAAAATTTAGCAATTTTGTGCATTTGATACCATAGTGCCCAGGCACCATGGTGCCCTATA
TGAGTGTCCTTTTATTATATATATATATATATATATATATATATATATAATGATTCTGTACTCCAACCTGCTTGTATCCA
CCGTTCATCAAAGGCCCCTCGCATCATCCATGCTACCGGGTCTCATCCTAGAATACCCGCTTTGATTTTTCGTTTTTAAA
AACAATAACATGCATGATTCTTAATTATCCCATTCTTTTCGGATCAACAAACTGTCCACGTAATTAAATCAAATGACTAA
TCCTAGCGTACTACTCCCAGCCATTCAACGTCGCCACGAGCGGCGGCTAGCTCTCGTCCCTCCTGTACCAATCGTCGTCG
GCGGTTGTGGTGGCATCTCCGACGAGATTCCCTGGTGAGGTCGTACGTGCTCCACTTCTCCCCGTCGACAGCGAATGGAG
TGCTGCAGTTTCTAATCCTCGGCGGATCCATGGAGGAGGTAGACAAGTAGTATATATAGTCTTCTTCTGAGTTGATCTGA
GTCCCTCCCGTCCAGATCAAATCTTCAATGGTGCTGGTAATACAAGTCCTTTGTTGTAGACCGAAAAGATTCCCTGAATC
ACTTCGATTAATTTGTCTGCTTAATTAGATCCATTACTTCTCGTTTGTTTGATGCGAGGCCCTTTGTATGATTAGGCATA
TAATTTCTTTGTTGCATGCAGTGTCGTAGATTCAACTCATCCTCCCAGCCCTCACCCTCAGCGTTCCCAGCCGAGTGGTG
CGCGGCCGCTGCGTCAGTGCAATTTGTTTTCTGGACCGGCGAGAGCTCCGGCAGATCAAACCCATTGCGTCACACTGAAA
ATTGCAATATACTATTTTGCTGACAGCTTCTACAGTGAAGGTACCAATCAATGAGCTAGCTAGTGTAAGACTGTAAGCTC
AGTCGATAATAGCACCTCTCGGTAGTACATATTTTTAGGTATTAATACTCTGTTACTAGATATATAGTATATACTGATTT
TAAACTAAAAACAGTATGCACAGCTACTAAACTAAAAAACAGTATACACTAGCTGGTACAAACTTTAAAAAAATAGTATA
TACTGATGTGGCCAGTACATACTTTTTTTAGTTTAAAAACAGTATATACTGCTACTAACATAAAAAATAGTATATACCGT
CTTTAAAAACTATCAGCACAAAGATAACATATTTGATTGCTCCATTAATTCACAACGGCAGCCGTACATGCTGGTGATGA
ACATGTTTCCGGATGACGCAAACCAAGAAGCCGGAAGAATGAAACGGTATGTGACAAATGAAACCAGACTAATGAACCAC
TATGCATAACATCGCTATGAGCATTTGCCAGTGAGCCAGTATCAGTATGTGATCCTGATGGGCATGTCTTAGTATATATA
ATATACTGCTACTACATTAAAAAGTATATACTGCTTAAAACAAATTAAATATGCGTTTATACTACTTCTAACTATAAAAG
TAGTATATGCCCGACTTAAGTGTATATATATACTGGATTAAAAAAGCATTACATACTGGGATAGAACAGTATATACTGAA
AACAAATAGTATATTCTACTATAAACAGAACAAAATATGTACTGAAAAAATATAGTATATACTAGTGAAAAGAGTATATA
CTTGTACTAACTAAGCAAAAAGTATATATAAAATTTTGAATGTCGCCATTCCTCACCGTCCGGTGTGCATGCATATGAAA
ATTTGAAAAAACAAATAGAACACAACCGACATGCATGCAGAAATTTGAAAACAATTAAACATTATTTTTTAAACCCAACT
ATTCATTACCAACTAATGGATATCCAACAAGGAGGAGGGAGTATGTACACCCAGGTGTACAAAACAGCCGTAGCAATCCA
ACAAATATATATAGGGGATGAGAACGATTGGTACTCAACAAGTCCAACTATAGCAATCCAACAAATATATGCCCATAATC
CACTTGCATAATACATATATCTCCAAATCCCATAATCCAACAAGGAAGTTTTATGCATGTTCATAAACACAGTGTAGTAA
AAGCTCATATTAAGCAATTATAAAATCTACTACATATAAGGCACCATAGGTATTAGAACCTCCGATAGGTTCCTTTCCTG
CCGCATTCGCAGTTTCTACCCGAAAAGGGAGTGACATATC