Basic information from miRBase |
hairpin accession number: MI0001718 |
Located between position 11975952 and 11976126 on chromosome 06 strand + |
mature miRNAs for MI0001718: |
osa-miR446 (MIMAT0001616): CATCAATATGAATATGGGAAATGG |
References |
[1]Sunkar R, Girke T, Jain PK, Zhu JK, Plant Cell. 17:1397-1411(2005)., "Cloning and characterization of microRNAs from rice" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CAATGGCTTAAGATGCCGATTCTCCGTTCCCTTGGGCTTCTCAAATACCGCCTGCTCCGATGATAGGACTAGCTTGGCCG
ATTCTTCTTCCACTTCATCGACATCGGCCTGACTAATTCCGAATTCGGTTGGCAGCGTAAAGACCATGTTGATTGGTGCT
GTAACAACACTCTTTCCTTTTGCCAACCTCTTCGCTTCATCGGCTGTAGCATCATCGGCTGCAGGAGCTTGACTCTTAAC
GCGCCACACCTGCCTCGGTCTTGGTTTCTTCAGCCGATGATTGATTTCCTCTTCAACCTCCTGAAAATGTTCCCTGCTCC
TCAATCTCTGGACCCTCCTTTTCTGGTTCTTTGTGAAAATACCAGAAGGACACCATTGATTCTTCCTGGTCGGCTCGTCT
TCTCGACCATGATCTTGACCCATCGGACCCAACCTTTGATGAACAGGGAGTCTTGTCTGTCTTGGCCGATCACCCCTATT
ATGTGGTCGGCTTGAGCTCTCAATGACATCACTACACCCAGGACAGTTTTCAATAGATGGCAACCTCATTCTTTCGTTCC
AGCAGAATCTGAAGAACTCACAATCCCAATGAGGATCAAAACCATTGTCGTTCTCCTCATAACGTCTCCCCTGGTGCTTA
TCATACCTCCTTTGATATTTATCAATAATTCTAGCCGAATGTACTTGGAAACCCTTTGAACGAGGTCCATCGGCTGCTTG
ACTTGCTGTATGCACCATATTGACGGGAAAAGGATTCCCATCGACCTTCATCGGCTTCTTGGAATCGTCAAACTTAATCT
TTCCCCCTTCGATAGCCACTTGGATTTGCTGTCTAAAAACCTTGCAATCGTTGGTAGAATGAGATCCAGAATTGTGCCAC
TTTCAGTATATCTTCTTGCCTAATTCTTCAGCCGATGGGATCGTATGACCGGCAGGAAGCTGAATCTGCTTTTCTCAGAG
TAGCAAGTCAAAGATCTTGTCAGCTTTAGTGATATCAAAATCATACTTTTGCTCCTTTCTAGGACTTCTCACCCATTGAC
ACGGTATAACCTTTTTGCTCCTTACCCACTCGGCTGCAGCTATCTCAGAGTCATCATCTTCATCGTCCGATCCATACATA
TACGGGCAAACGTGGTTAACCTTTTTAGAGCTCCTCCTGACGTCAACCGACCTATGCTCATGCAAGGTTACCTTTTGTAT
CAAATGTGATAGGCTATCGAAGTCTTCGGATGAGAACTTCTCCCTGATTGGAGGGATCATACCCTGGAAAGCCAAATCGG
CTAACTGGGCATCGGTCAAACTTAAGCTGAAGCACTTGTTCCTCATCTCTCTGAACCTCTGAATATACTCGTGTACAGGC
TCATCATACCGCTGTTTGATTGCTGTTAAATCGGACAACTTCATTTTGTGGACCCCGCTGTAGAAATAGCTGTGGAACTG
CTTCTCTAAATCGGCCCAACTATTGACCGACCCATATGGCAAAGATGAGAACCAGGTAAAAGCTGATCCGGACAAAGATA
ATCGGAACATCCTAACTCTCAAGGCGTCCACAGCCGATGCTTCTCCACACTGAGCAAGATATCGGCTGATGTACTCATAA
GTTGACACGCCCTCTTGTCCTGAAAACTTGGAGAAATCTGGAATTTTAAACCGATTGGGAAGAGGAACCCTCTCGAACCA
CTCGGGATAAGGTTGCCGATACAAACTCCCAGTCTCTTTTGGCCTGAGCCCAAATTGCTCCCTCATTACGTCGGCAATCA
CATCGGCCCATGGTCGTTGCTGACCTGCTCCATGCGATTGCTGCTGCATGGGCTTAAACTGACCAAACTGGGGAACAAAC
TATTGCTGGGCCGATCCCCCTGGTTGATACTGGGCTTGCGGGGATGGAGGCTGATACTGATAGCTTAAGTTGCCTCCTTG
GTAATTATGCAGATTCGGCTGGATATTGCGTACCAAGTGCTCAGGAACCATCTGGGGTATCACGGTGCCGTCCGGTTGTA
CGTGATGAACCAAATGTTCTGGGGTGGCTTGATTCACAACTTGCTGCGCAGGTTGCCCCCCAAGTGCTGCGAACCCAGCC
GATGCATTGGCTGACCCCAAGTGCTGGATCGGCTGTTGCCGTACCGGAGTCTGTTGAATCGGCTGAAGCCGTTGCCTTGG
TGGCGTTTGCTGGATTGGTTGGAGATGCTGCTGGGTTAACGGCGCTTGTTGAACCGGCTGCGCAACTTGTTGTTGGGCCG
GATGTACCATCGGCTGAATTAGCGGTGCCTGCTGCATTGGCTGTACGGCCTGCGGTTGGATCGGTTGCACCACCGGCTGA
GTTGGTGGTGCTTGGTGCGCTGGCTGCGCGACCTGCTGTTGGATCTGTTGCACCACCAGCTGAGTTGATGGTGCCTGCTG
CGTTGGCTGCACGACTTGTTGCTGGATCGACTGCACCACCAGCTGAATTGGTGGTGCCTGCTGGATCGGCTGCTGTTGCG
CCGGATCAACAACTGGTGGTGGTGGGAGAAACAAAGCAGCAACCTGATCTTGAGTTGGCTGATTCGAGGTCTGTCCAGCA
GGCTGTGAATATTCCCTCATTAGTAATCGAGGGTTCATCGGCTGAGCTGCCGCGGTAGCCGATGCAGCAGGTAAGGGTGT
TGATGCTGATGCTGTTGATTGAGCCACGGGTGCGATAGGTGGAGCTGCCTGCACAACTGGTTGAGCATCAGTGATTAAGG
TTCGATAGCTTGGAAAAACACCTCCTGGCAAGTAGACCAGGCCTGTAGCCTGATGCTCAGCTATCGAGCCATCGGCTATC
GTCTTCATCATGTTTGACAGTGTGTTGACTAATACCCCGGATTGATTGATCAAAGCATGGTGCACCGCGTAGTCAACCCG
ATCCTGAAAGTTGTTGAAAGACTCCTGAATATCTTGACTGAAATTTCCTCCTTGTAGTTCTTGGGCAATACGACTTAGAG
CTCCAAGCATCTCTGGAAGGTTATCGCCTTGATTTCCTGC