Basic information from miRBase |
hairpin accession number: MI0001070 |
Located between position 5020237 and 5020486 on chromosome 4 strand - |
mature miRNAs for MI0001070: |
ath-miR401 (MIMAT0001002): CGAAACTGGTGTCGACCGACA |
References |
[1]Sunkar R, Zhu JK, Plant Cell. 16:2001-2019(2004)., "Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis" ![]() |
>promoter (3kb upstream pre-miRNA, by PMRD):
GAGCTGGTGGCTGATTATGATCTGGAGATAGTCACATTTCCACCAACATACTCGATCACTAGTAGCAGAGAGGGAAGCAG
TCAGCTCAGCAGTCCACCTAGACACTTATACTCGATCGCAGAGGAGAGGAGGCAGTCCCAAATGCAGTTCTACTCGATCA
CAGAGCTAGAGGAGTCCATCCTGACTATTCTACTCGATCGCAGAGGCGACCAGGCAGTCCACTTTGCCTGTCCACCAGTT
CTACTCGATCGCGGAGGAGAAGAACCAGTCCATCTTGACAGCTGACACACATACTCGATCACAGAGGCCAAGAAGCAGCC
TAGACCATTCTATGTTATTGTCTTTAAGCATGTTGTCTGAGTAGTGATTAGGATTTCTGAGGATGGGATAGAGTAGTTGT
GGAACCCCTGGTCGAATATGTTGGTTAAGTGTAGAGTTATTGAATCCCTTTTGGATTAGTTGTGTTTACTGCTTATTCCT
TTCTGATCAACTGGAATCCGATCCCAGACGTTCCAGCGCTCAAAAGGCGTTTAATGGAACGTTGGATCTACTAATTCTAG
TGATAATCGTCTCTATCCCAAGTGATTGAACGTTTAGAGCGGTTATTGGCTTTAACAGTCGGTTCTTATTGCCTGCTTAG
TTAGAGATCGCTCTTGGGAATTAGGTCAGTGTCTAGCTATGCTTGAGGATTTCTATCACGGGAGTGAATTAATCTGTTGT
TGAACCTGTTGTCTAGGGATAGCTTAATTGAGATTTGTTAACCAACTGAATTGATTAGGGAGACCACACTATTCGATTAC
CCCATCCTTAGGAGTTTCTCATCCATTTGATTCCTCTGTTTACTTACCTGCTTCATTCACTTGCTATTGAATTTTAGTAT
TTTTCTGTTTTCAACCATTCTACTCGATCACACCCTGCTACTAACAGTGAGAATGTGTGATAGAGTAAACTGGTCCATTT
CTACATTTTCACTATCTGTCATCCTGTTGTACTCGATCACAGGGTCTCTTCTGGCAGTCGACCCGACGATCAAGTATATC
AGTCATTTCTGTGACTTTTTACTGTTTTCTGCATCAACATTAGGACTGTTAGAAAACCAACCAAATTCTGCTTGGCTTGA
CTTCACAACTTCTGATTATATCTCATCTGTCTGCATCACACCCATTTGGATTGACACCTAAAATATTACAACGATAGGAT
TAGTGTTTTAGGATAATTGATCTTAAAAACCTATTATCAATTTGGCGCCGTTGCCAATTGGGTGTTTTCTTTGCTATATT
TGAGATTTTCGGAAACGTTAAGATCAAGTTCTTTTGTTAAGAGGTTACTGACTCCATGTCTTTTTCTCTGTTTGTGTGTT
TCAGGTGCTCACATTCACCAGCTTCCCTGGACCAGTCTCTGATTGGTCTGTTCAAGCTGTGCTGATATCTATTGTATGCA
AACACGGTCTCAAGGACATCAGAACCTCCTCTTCAAAGACAACATCGACTGCATAGCTCGCTCTCTAAGAGAACAGACAC
ATACAAACACGATGGCTGACGTTGTAGATGAGCAAGAACTGCCCAACAACATTGGCGTTGGTGACTTCCCACACAACCAT
AACTTGCGTCATGGCATTGTCCCTCCACCGGTTCAGACAACAATTTTGAGATCAAGAGCGGTCTCATTGCTATGGTTCAG
GGGAACAAATTTCACGGCCTGCCAATGGAAGACCCACTCGATCACCTGGACGAGTTTGAAATGCTTTGCAGCCTAACAAA
AATTAATGGAGTTAGTGAAGATGGTTTCAAGCTTCGCCTGTTCCCGTTTTCACTTGGAGACAAAGCCCATCTGTGGGAGA
AGACGCTACCCCAGGGATCAGTCACAACCTGGGACGACTGCAAGAAAGCCTTCCTGGCTAAATTTTTCTCCAACTCCAGA
ACCGCTAGACTCCGGAATGAGATATCTGGATTCACACAGTAGAATGCTGAAACCTTCTGTAAAGCATGGGAGCGCTTCAA
ACGCTATCAGACCAAATTGCCCTCATCACGGGTTCAAAAAAGCTTCACTTCTCAGCAGTCTCTACAGAGGTGTTCTTCAT
AAGATTAGGATGCTTCTTGATACCGCTTCCAACGGGAACTTCCTCAACAAAGATGATATGGTTCAAATTACCTAGAACTA
CTCTCTCAAATAAGAGATCAATTATAGTATTTTAGGATCGAATTCACGGAGTTCTTTTGTTCAAACAATGAGTTAAATGT
TGAGATTAAGCTAGCAGAGTAATAGTGAGAATAAAAGAGAACAAAGTAAAAAGACAGGAGATTGATTTGGTTGTAAACGA
TTTTAATAAAGAGCTAGGAATAGGGTATTCTCAGGAAACTATTGGTTAGTAGATCTAATGAAAGCTAGATTGTTATTGAA
CCATTCTTAAACTCAAACTCTAATTATGGAATAACCGGTGGGCGTGCCGCGAAACTCCCTATATCTATAGCCAATAATAA
CTGGAGAAGCCGAGAAACTATCAACCTAAATATGCATTCTTAACGAGTTCAATTGTTCATCTTAGTAGATAGGCCGATTC
TTATTACACATCTATAAACCAGACTCATCAAATAATAGATCCAACTACAGATACCTATGGCGGGCATATCTATTGTCTGG
ATTCAAGATCTAGTTAATTACTCTAGATCTAGCATTAGGAACAATTAAAGATGAAGAATTCTATAGATAACCTAGCAAAG
GGGGCAATCTACTAAACCATACGAATCCCTAATGAGAAACCCTATTCCTAACAAAGCAGACTACTTAGACATATTGAATG
AAACAAACAACATATTTTGAGATAAAAAGCATAAACATAGTAAATAGAGAAGGGGAAAGAAGGGATCTCTTCACTGTTTA
TAGATCTGAATGAAACTCTCAAGAATAATCGATGAATAGCTTATGTCTCTCACAATAGGGTTTTGCAAAGAACTTTATAA
AAGACTTGATAAAAGAAACTTAGGTCTAAAAAATATATAT