miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005219
Located between position 23920300 and 23920483 on chromosome 04 strand +
mature miRNAs for MI0005219:
         osa-miR807c (MIMAT0004035): CGTCATCTCACAGGTGAATCC

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
CATGTGGACGTGCAACCAGGGCACCGCGTAACAAATGTTTTCCAGAGGGCTTGTCCCATTAACGTCGAAGCCATTGTCTA
AAATCATACTCCGGCTTATGTTAGCAGTGACGCGAGCTGAGCGCTCGCTCGCTCACGTAGGAAGAGAAGAGACGATGCAT
AACGCACCAAAATGTGACAGAAGACGTGCTGGGAAAACAACCAGCAGCAGGAATCACAACACGCTGATCGATCGATCTCT
CTTATCCACACATGATTGATCCATCACGTACCGGTCCAACGATGTGACAAATTTTACAAGTAGCGCGGATCAAAGATCAA
GTGGACAGAGTACATACATTAATTAATCCATATACACTCCCCATGTGTGAGATTGTTTATCTTGAGGCTAAATGCGTTTG
CCACCAATAATGCGAGCTCGAGCGGCACAAAGCTAGGCGTATCCAGGTAGCCGACGTACGTTGAGACAAACTGAACGATC
TTGCCGGCCGCCATCCATAATCACACGGGGAAAATATATATATATATACGGAGTATATATATGCATCGATCCAGAACTCG
CCATTGGAATCTATCGTTGGTTTCGTTAATTTGCACGATATCGTGTCGATCGTTGGCTAGCTAGTTAGCTAGCATGATGA
TGTAGATGTACTATACTATACTAATGCAAGCAAACACATTAGGATTACGTCCGTCCAGCTAGCTAGATTAGATGACAAAA
GAGTGTATCTAATTTGGTGGATCTCCTAACAACAATTAGCTTTCAAATAGAGCAATCTAAACTATACCGACACTACCGTA
GAGATGATGGACGGACTTCTATTCTAGAAGGCCGTACGCGCGCGGTCTCGTGCGTACGACTCTACGAAGCGCTTCGTCCT
GTCGTGCACGCATGCACCTAGTATAGGAGTAGCTAGCTAAGCTAAGCTAGTGAAAATCCTGCATCGGTCGTATGATCTCA
TAATGAGGACAAATAAGAAGCTAGCCAGGCATTCATTATTAGGTATACATATCCACATCATCACCACATGGGGGCGGATC
CAGCACGGGGGCGGCGGGGTCTCGAGCCTCCACTACTGCCGTAAAGAAGATGAGAGTCCCTACGAAGACCCCACAAAAAT
TTTTTACCATATGTAGATGTTAGGGGGACTATAACTCTGTTTAGTTTGCTCCGACTCCACTGCTATGCCAACTCGCTGCA
TTGATCGATTCTGCCGGGCTAAGCTAGCTATACAGTTTTATATGTATACCACGCGTACGTACGTACGTGCACAGTACTCC
CTCCGTACACGTACTACATGCACCGTACTACCGTAGTTAGCTATACAGATAGTATTACTTTTCGTCTTTTCGTACACTAG
CTAGCTTATGGACCATATATACGCATATGCGTTACTCCTTTCGTTTCAATAAATATATATATATATATATATATATATAT
ATATATATATTCCATCTATCTTATACGTACATACCAATACAATATAAAAAAAATAAAAAATATCCTTAAATACCAATACA
ATGTAATTATTTTTCACTTTATCTACTTTCAATTAATTTATTTCCTACTTTTTACAAACTCCGATACAATAATTACTTAA
AAGTAAATTTATTTTAGGATAAATAGGGAAAGGAAAAAAATTGAACATATCATAAGACAAAAAGAGTAGATTGGTGGGAG
TACATAAATACTTTCCCGGTCTAAAAAATCAGCCTTTTATTTTAAATCTAGACACAAATATGTACTCCCTCCGTTTTAGG
TTATTAGATGTTTTGACTTTGGTTAAAGTCAAAATGTTTAAAATTTGACTAAGTTTATAGACAAATATAATAATATCTAT
AATACTAAATTAGTTTCATCAAATCAATAATTGAATATATTTTCATATTAAATTTATCTTGGGTTGAAAATGTTAATACT
TTTTTTAGAAACTTGGTCAAACTTAAAGCAGGTTGACTTTGATCAAAGTCAAACTTCTTATAACCTGAAACAGAAGGAGT
AATAAATACTGACATTTTAACTTTTTCTTATGATTTTTGAGATGCTATTTGACCATAATTTGTTAGTCATGCTAAATTTA
TAAAAATCTAATAAGCTTATGAGATCATGAAAGTAGTTTTTTTTAAAAACATAAATGTATATGTTCCTTTTTATATTTTG
CAACTAAGTATATTTTTTATAGTATAAGTTTAAACTTGGTCCGAACAACGTCAAACGTTTTGGATTGAGAAGAGTAAGAG
AAAAGGTTATTTAATTATAGACACTTCCAATTATTCTCAATACTTTCGACGAGACGATGGCCAAGGCCGATTCTATCTTG
CTATATATATGACGTGAACATATTGTACTTATAGGTCAATTAAGTGGGTAATTAGGGTTCGTACCAAGCAGACCATTTGC
ATTCCTACTCTCGATCGTCTGCTCGCATCGCTACCACACGTACGTGCTATCGTTATATATACGTGAAAACTTTAGCTAGA
TATAACTCTTTCTTCTAGATATATATAGGTCTTTTTATCCAAAGGAGCTGGTCTTTTACTCTCAGGTTGCAAACTAAAGA
AGGTCAAGGACCACAGGCCAGATCAAACAATCGCATATATATAGATCAACTAAAGATGCCATCTTATATCACTCGATAAT
GGAATATATATGTAGTACTCCGTCCTTTGCCACTATGCCGTCCTTTCAAACGTCCCAAAAGGAACTGCCAATATTTTGAC
AAAAAGCTAGCAAATCATGTGTGCATGACTGCATCTACGTCTTAGCTCGTTCAGCTGGTCCATCAGATTTCAGAGCGAGC
GAGCTAGCAACAAACACACCCACCTGTAGTTTTACCCTTTTGCCACACAAAAACATGTACTGTCACAAAGCAACTAGCTA
GAGCCAATCATGTCATGTGGACAGCGAGCATATACACACAAATCTACTTAATTTGCTTCTTAGGTAATGATGATGGATAA
TGTATCTCGCTTTCGTTGTTTTGATGCGGCAAGTCGATCG