| Basic information from miRBase |
| hairpin accession number: MI0001010 |
| Located between position 26269979 and 26270078 on chromosome 1 strand - |
| mature miRNAs for MI0001010: |
| ath-miR395d (MIMAT0000941): CTGAAGTGTTTGGGGGAACTC |
| References |
| [1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
| [2]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [4]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GTATTGTTTACTAATTTGATTATTATTATTTTTTGCTACAGACATTTACTAATTTGATGGTCAAAATTGTAGTCACCATT
AAAATTATTTACATAAAAGAATTGATTATTTTACTTCCCTCAATTATCAAATATAAATTTGTGATGAATTTGACCGAAAT
GAAGATGTCTGAATTGTTTGAGCCACCTAAATGTTTAGATGGTCGATTCTTAAAAAGGAAAGAAAACAAAATGACCAAAA
GAAAGAAAACGTATGAAACTATGATCCATCAGATATTACTTTTAAATCAATCTTGGGCTCAGGCCCGTTACTACCGTTTT
CTATCTTAGAATTCGGCCCATCCACGTCAGCGACTCCGGTTATAACGCTGTTAAACTCTTTTGACACACGACCACTTATT
ATAACGTCACGTGTCAATGCACTTCATCAGGACGCGCGTAACCGCCAGAAAAGCGAAACCAAAGGTCCATCTCCGACACG
TTGCTTATCCGACCACACTCACCACTGTTCTAAATTCTCTCTTTTTTTTTTCCTTAACCAAAAAAGCTCTCTTTTTTTCT
TCTGGGTTTCATCGTTTCCAATCTAAAATCATCGTAGATTTGTTTGAAATTCTTCAAATTGAGCCGGTATCAAGACATGG
CGGGAAGTGAAGCGGTAGAAGATAAGGAGATAAAATCGGCGGTTTCAAGCTGTGAAGCGTATTTCGAGAAAGTACAATCA
AGGAAGAATCTACCCAAATCTCTTCAAGAAACCCTAAACTCTGCTTTCGCCGGAATCCCAGTCTCCTCCTTCCCTCAAGT
CCCCGGCGGCAGAGGTAAAAATTAGAAAGATCCCATTTTTTTCGATTCCTCCAAATTTCCTGATTTCTCGTTTAAAGTTT
GAGACTTGGCAATGGTTTAGATTCAATTAGTGTTTTGTTTGATCGTAGTGATAGAGATTCAAGCGGAAACACCTGTATCA
GAAGCAGTAAAGATCTTATCAGATAGCAAGATTCTATCAGCTCCTGTGATTAACACAGATCACGAGAGTTCTTTAGATTG
GAGAGAAAGATATTTAGGAATCATTGACTACTCTTCAATCATCTTATGGGTGCTAGAGAGTGCTGAACTCGCTGCAATCG
CGTTGTCCGCTACGTCAGCAACTGCTGCTGGTGTTGGTGCTGGAGCTGTTGGAGCTCTTGGTGTTGCAGCGCTCGGGATG
ACCGGTCCGGTTGCTGCTGCGGGGCTAGCCGCAGCTGCGGTTGGAGCCGCGGTTGCTGGTGGTGTTGCAGCTGAACGTGG
GATTGGAAAAGATGCTCCAACTGCTGCTGATAAGTTGGGGAAAGATTTCTATGAAGTTATTCTTCAAGAAGAGCCTTTTA
AATCAACCACTGTAAGTTTTTTAACAGAACATTAAGTTATTTGTGTTGTGATGGTCCTGATTGATCATGGATATATGTTT
ATGTTGTCAGGTTAGAACAATACTTAAGTCGTTTAGATGGGCTCCTTTTCTTCCGGTTTCAACAGAGAGTTCGATGTTGA
GTGTTATGTTGTTACTCTCGAAATATCGGTTAAGAAATGTGCCGGTTATTAAAACAGGAGAACCGGATATCAAGAACTAC
GTTACTCAATCTGCAGTTGTTCATGGTCTTGAAGGTTGCAAAGGTAGAGATTGGTTTGATCACATTTCCGCTCTCCCGAT
TTCTGATCTCGGCCTCCCGTTTATGTCACCCAATGAGGTAATAAAATAAACTTTAAGAAGTCATGACATTAGGCTCGTAA
ACCGGTGAAATTGAACATGTTGGTTTCAGGTTATTAGCATTGAGAGTGAGGAACTTATCCTTGAAGCATTTAAAAGGATG
AGAGACAACAACATTGGTGGTCTCCCTGTAGTTGAAGGGTTGAATAAGAAGATTGTTGGTAACATTAGCATGAGAGACAT
TAGATATTTGCTTTTACAACCTGAAGTCTTTTCCAATTTCAGGTTTATTTTTACTCACTTGTTTCTCATTACAACTTCTC
TGGTAACAATGATGACTGAATGATCTCTTTGTTGATGATAAAGACAACTCACGGTGAAGAGTTTCGCGACAAAGATTGCT
ACAGCGGGAGAGGAATACGGTTTAGCGATTCCTGCAATAACTTGTAGGCCTGATTCGACTTTAGGGAGTGTTATAAACAG
TTTGGCTTCGAGGTCGGTGCATCGGGTTTATGTAGCGGCTGGAGATGAGAATGAGCTTTATGGGGTTATAACACTGAGGG
ATGTGATCTCTTGTTTCGTATCAGAACCTCCAAATTACTTTGAGAACTGTCTCGGTTTCTCGGTTAAGGAAATGCTTAAC
CGATGATCTCTTGTTTCTCAGCTTTTTTTTGGCTTTGTTGTTTGTTCTTTCTTGGTTTAGATTTCTGAAGTTGTTGTCTT
TATATCTAATTTGTAACCAACCATTTTGAGTTTTAAAGTTCTATCATTAACGACATCTTAGGATTGAAAATATATATGTA
CTGTAATGATTGGATAAAAAATTTTCTGTTTTATGGATTGTTCAATTTCATATTTGTGTTTGTGTAAGTCTCGCCAATTC
AATGCAGCTGATTAAGTTCAACTTACAGGGAAGCCAAACTAAGAGTTTAATCAGCTTGAAACAAATTGTATAACTAACAA
ATGAAATGACTCACTCATGAATGATAGATCAATAACCAACCACATTACTTATCTTCTTCATGAAAAGGCTCATAACTCAC
CTCAACCGTTGACTACACCGCTCGATAATTAATATAGCCTGTGGGTGCCAAGATGTCACCTAGAGTCCCCCCAAACACTT
CAGTGTTCATCAGATTGATTGATCGATCGATAGATGATAACAAAGTATGAACAATGAAGCGTTTAAGGGAACTCAAGGGG
ACATTTGACTTTACATGTTATGTCTCTTTTGCAAATGCTTCTTCTCTTACTCAACTGACCTTAGCGACAACCCAAACTGC
ATATTTATAGTCTATAGATACTTGCCAATGGAATTGTTTT