| Basic information from miRBase |
| hairpin accession number: MI0001012 |
| Located between position 26273858 and 26273969 on chromosome 1 strand + |
| mature miRNAs for MI0001012: |
| ath-miR395f (MIMAT0000943): CTGAAGTGTTTGGGGGGACTC |
| References |
| [1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
| [2]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [4]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
ATAAAGCTCATTCTCATCTCCAGCCGCTACATAAACCCGATGCACCGACCTCGAAGCCAAACTGTTTATAACACTCCCTA
AAGTCGAATCAGGCCTACAAGTTATTGCAGGAATCGCTAAACCGTATTCCTCTCCCGCTGTAGCAATCTTTGTCGCGAAA
CTCTTCACCGTGAGTTGTCTTTATCATCAACAAAGAGATCATTCAGTCATCATTGTTACCAGAGAAGTTGTAATGAGAAA
CAAGTGAGTAAAAATAAACCTGAAATTGGAAAAGACTTCAGGTTGTAAAAGCAAATATCTAATGTCTCTCATGCTAATGT
TACCAACAATCTTCTTATTCAACCCTTCAACTACAGGGAGACCACCAATGTTGTTGTCTCTCATCCTTTTAAATGCTTCA
AGGATAAGTTCCTCACTCTCAATGCTAATAACCTGAAACCAACATGTTCAATTTCACCGGTTTACGAGCCTAATGTCATG
ACTTCTTAAAGTTTATTTTATTACCTCATTGGGTGACATAAACGGGAGGCCGAGATCAGAAATCGGGAGAGCGGAAATGT
GATCAAACCAATCTCTACCTTTGCAACCTTCAAGACCATGAACAACTGCAGATTGAGTAACGTAGTTCTTGATATCCGGT
TCTCCTGTTTTAATAACCGGCACATTTCTTAACCGATATTTCGAGAGTAACAACATAACACTCAACATCGAACTCTCTGT
TGAAACCGGAAGAAAAGGAGCCCATCTAAACGACTTAAGTATTGTTCTAACCTGACAACATAAACATATATCCATGATCA
ATCAGGACCATCACAACACAAATAACTTAATGTTCTGTTAAAAAACTTACAGTGGTTGATTTAAAAGGCTCTTCTTGAAG
AATAACTTCATAGAAATCTTTCCCCAACTTATCAGCAGCAGTTGGAGCATCTTTTCCAATCCCACGTTCAGCTGCAACAC
CACCAGCAACCGCGGCTCCAACCGCAGCTGCGGCTAGCCCCGCAGCAGCAACCGGACCGGTCATCCCGAGCGCTGCAACA
CCAAGAGCTCCAACAGCTCCAGCACCAACACCAGCAGCAGTTGCTGACGTAGCGGACAACGCGATTGCAGCGAGTTCAGC
ACTCTCTAGCACCCATAAGATGATTGAAGAGTAGTCAATGATTCCTAAATATCTTTCTCTCCAATCTAAAGAACTCTCGT
GATCTGTGTTAATCACAGGAGCTGATAGAATCTTGCTATCTGATAAGATCTTTACTGCTTCTGATACAGGTGTTTCCGCT
TGAATCTCTATCACTACGATCAAACAAAACACTAATTGAATCTAAACCATTGCCAAGTCTCAAACTTTAAACGAGAAATC
AGGAAATTTGGAGGAATCGAAAAAAATGGGATCTTTCTAATTTTTACCTCTGCCGCCGGGGACTTGAGGGAAGGAGGAGA
CTGGGATTCCGGCGAAAGCAGAGTTTAGGGTTTCTTGAAGAGATTTGGGTAGATTCTTCCTTGATTGTACTTTCTCGAAA
TACGCTTCACAGCTTGAAACCGCCGATTTTATCTCCTTATCTTCTACCGCTTCACTTCCCGCCATGTCTTGATACCGGCT
CAATTTGAAGAATTTCAAACAAATCTACGATGATTTTAGATTGGAAACGATGAAACCCAGAAGAAAAAAAGAGAGCTTTT
TTGGTTAAGGAAAAAAAAAAGAGAGAATTTAGAACAGTGGTGAGTGTGGTCGGATAAGCAACGTGTCGGAGATGGACCTT
TGGTTTCGCTTTTCTGGCGGTTACGCGCGTCCTGATGAAGTGCATTGACACGTGACGTTATAATAAGTGGTCGTGTGTCA
AAAGAGTTTAACAGCGTTATAACCGGAGTCGCTGACGTGGATGGGCCGAATTCTAAGATAGAAAACGGTAGTAACGGGCC
TGAGCCCAAGATTGATTTAAAAGTAATATCTGATGGATCATAGTTTCATACGTTTTCTTTCTTTTGGTCATTTTGTTTTC
TTTCCTTTTTAAGAATCGACCATCTAAACATTTAGGTGGCTCAAACAATTCAGACATCTTCATTTCGGTCAAATTCATCA
CAAATTTATATTTGATAATTGAGGGAAGTAAAATAATCAATTCTTTTATGTAAATAATTTTAATGGTGACTACAATTTTG
ACCATCAAATTAGTAAATGTCTGTAGCAAAAAATAATAATAATCAAATTAGTAAACAATACGTATGTGATTTCAAATAAT
AATACGTTGTGTTGATAATTTGTCAAATAACCCACTATTTTATGTGATGCTAACTAAAGTTTATTTTGTAAAAATCAAAC
AATTTTGCAAAAGTGAAAGAGGGAGATTTTGTCAATCTGCATGAAAACCACCTTCCATTTTAGATATCATTGTGTCATCA
TAGTCATACTTACTTAATTCACCAACAAAAAAAATTAACATTGTATTTAAAATTTTTATAAGCATAAAAAAATATTTGGT
GTATCAAATTTGTGTAGACCATTAATTTACAAAACCTTCATATACATATATAATCCATGATATGATAGGTAATCCACTAA
TTTAAACATTTGGATATCTACAAGTATATAAGCATTTTGCATATCATGCCAAAACCAGATCTCTCTTTCAGAGGCTGAAA
AACAAATGAATGACAAAGAAAACGGAAATCAGTTACTTTCTAGACTTGTGTCTAGCTATACCGATACAGTTACTGGCTTA
TTGCTGTCCGGAAAGTCTCGTTCGATAACGGGCCAATAATGAATCTGTACTCAACGGAGCTTGTGTTCGCAAGCCACTAA
AGTTCAAGGTGTGGTCATGCGATGATGGAGGTGGAGGATCTGGAGAGGAAAAGTTGAGACTGAAAGAGGAGGACGATAGA
GGGTAGTCGTCTGGTAACTGATTGGGATAGTTTGGTCGTGTGAGGTCCAATGTTACAGTCGGGTGCGAGTTAGTGGTGGA
GATAGAGAAGTGGTGAAAAGGGAAGAAATAGCTTAGACTC