miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001130
Located between position 6077280 and 6077452 on chromosome 11 strand -
mature miRNAs for MI0001130:
         osa-miR169o (MIMAT0001060): TAGCCAAGAATGACTTGCCTA

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
GGCTGTCTAAGGCCCCTGTTTGTTTCAGTTTAAGATTACTGTAATCTAAATTATTAAGTTAGATTACTATAAGCTGGATT
ATAATAAGCCGATATAGATGTTAGTTGTTTGTTTCTCTAGATTATTAGTTGTTTGTTAGCTGTTAAGCCATCCAATAATT
ATAAAAAAACACATTTAGAGTGGATTACCATATTATAGTAATTTGGCTTATAGATTGTAATAGTCTATCATAATAAGCTA
TCCGTTTGTTTCAGGTTATTCTTAATAATCAACATTATAATAATCCTAAGCTGAATCAAACAGGGCCTAAATGGCATTCA
ACAGAAAATACCCCTAAATTCTTACGAATTCTAAACCGTTACATCATTTTGAGATTCATTTAGTAAACATACCTAAACCT
AATATCTATTTCCCTCTCCCTTAACTGCCAACTTCCACCGCCACCACCGCCTTGCTTTGCTTCCTCACGCATGCCACTTG
TCTCCAGTGCCACCGCCGCCCAACCGTGCCACCACCCGACATCACCAGCTAGCCAAAAGACGTCAACGATGCCCGCGAGT
CTCCCCTCCGGCCGGCCTCCCCACTTCTCAAGCCCTCGCCACCAACGCTGGTCCACCACTCTTCTCCATCCACCGGTGGG
CCGTTATCTCCCTCAGCGAGCCCCCCTTTCTCCACCCTTTCTCCCGGAGTTTCATCAAAGTTGAAGGAATTGGGCGCACG
AATCTTCAAGCATACGTGTAGTTCAAAATCTGTAACAAAACCCCCCTCCTCATTTTTTTCTAATAACTTTTGGCAATTCT
TTTTTTTTATCACTCAAATCAGTTTAGTAATAGTGCATGAAAATAAACACAAGCACACGAACTGACTATAGTTTAGCTGG
TTAAGATACTTTATGATGGAACCTGCCTATCGTCTTTTAAAGTATAGAAATGTTTATACAAAATCAACCTTATACAAAAT
CCAATCAACCGTTGAACCAAAAGAAAATTCTACCTTTTAATGTTTGGAAAAAGTACAAATTACCCCCTGAACAATCGCGG
TCGACTGAATTACCCCCTGAACCCGAAAACCAGACATTGCTCACCCAAAACTTTTAATGCCAGACGAATTATCCCCCTCA
AAACTGTTTTGAGAGGTTTTGACTTGAGTTTGCACACGCGGTGATAATGTGGCAATCCAATCAGCAAAAAAAAAACTCCT
TGGACCCACCGGTCATACCTCTCCCTCCCCGGTCGCTTTCTCTCTCCCTGGTAGCACTCTCTCGCTCGCGAACACGCTCG
GGTAGGCGGCTGCGGAGGCGGAGGCAGACCAGGCTATCGGCGGCGGAGGCAGAGCTCGCCCGAGTGGCCGGTGGCAGAGG
CGGATCGGGCGGTCGGCGACGGAGGCGAAGGCCGATCAGGCGCCTACAGAGTTCTCTCTCTGTGCTGTTGGCGTTTGAGG
CGAGCAGCTGCAAGCATGGCCGGGCGAGCGGCGGCAGGTGCGACTAGGTGAATGCGGCCAACGGCAGGCACGAGCAGGAG
GGGGAATCGGTCGGCGCTGAGCGACAACGGCTGGGTGGCACTAATCGGCGGCAGGAGCGGCAAGAAGGGGGCGCAGCTGG
GAGTGCGCTCTAGGATGTGACGGGAGTGGCGGGGAGGAAGCTTCAGTCGACGGTGAGCGGCCCGCCTCGCTGGAGCCGTG
TCATGCGCCAAATCCCGCCTCGCCAAAGCCGGAAGAGGGGCGACAGGCGGTGGAGACATGCACCATCGGGTCCCGCCTCC
TCTTTCTCCTCTTCCCCTCTTTCACCCCCCCTCTCTCTCGGGCATCGTCGGCCACCAGCGCAGGTCGAGCGATGGCTAGG
GGCAGTGGGCGACAGCGTGGGACGTGGAGACGGAGCGGTGAACTCCGGGAGGGAGCCGGAGTGGTGGGGCAGCGCCGTGT
TGCCGCCCGTTGGCCTCCGCCTGCGTCGCCGGCCGCCCGGTCTGCCTCCGCCTCCATAGCCGCCTGCCCGAGCGCGTGCA
CGGGGGAGAGAGAGAATGTGTATGTGTGACGGGGAGAGAGAGTGTGACCGAGGAGGGAGAGGTATGACAGGTGGGTCCAG
GGAGTGTTTTTCCTGACTGGATTGTCATGTTGGCGCCAAATGTACAAGCTCAAGTCAAAACCGCTCAAAACAGTGTTGAT
GGGGATAGTTCATCCTGTATTAAAAATGAGTGAAGTGCACCAGTGGTCCCTAAACTTGTGCGGGTGTGTCATCTAGGTCC
TTAAACTCTCAAAATGCATTTTTGGGTCTTCGAACTTGTCTTCGGTATCATATAGGTCCAAACGGGCTCCGATCCACTCC
ATCCGCTGACGTGGCATCCACGGTTGCGCCTACGGGTCAGTGGGACCTACATGTCAGCTCTGTGCATCATCTCCACCGCC
CTGGGAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAGGAAAGAGAGACGCCGGCGGTGCTCGACGCGTCA
CGCGTGGCCGGGACGTGGCAACGCTGAGCTCCTCCCTTTTCTTCCTCAGATGTGTCGCCTTCTCTTCTACATTCTTCTGG
AGCCGAACTACTCGGACGAGAGAGAGCGCGCCCTATGCCTCTCCGTCGCCCACATTCTCGTCGTCGATCGCGAAGAAGAT
GACGCTCGCTGTTGCCGACGAGTCGTCTCCATCGCCAAATCTTTCCCGTTCCAAACTTCCCACATCATGCCGAGCAAATC
TCCTTTTGACCCCATCTCGTTTTATCCACTGTAGCAACGGAAACGCGACCTTGCCCACGAGAGCTCTGGAACTCGCACCA
GGCGCCGCCGCCATGACGTCGTCGTTGTTCCGGCCGACATGGTCCATCTCAAGCCAAGCCATCACGCCAAAGTCATCGCC
TCACCATCATGACCAAAAGCCCTCAAGAAATTTTAAGAATCGTGCACAGACGAGGGAGATCGCCGTCATCTTCTCCAACT
CCGGTCGCCGAGTGCCATCACCAATCCCTCTCTCCCCGGT