miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001120
Located between position 31199997 and 31200128 on chromosome 02 strand -
mature miRNAs for MI0001120:
         osa-miR169e (MIMAT0001050): TAGCCAAGGATGACTTGCCGG

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
TTTCCTCCCTTGTACCTTTTGCCTTAGCTAGTGTTAGTTAAAAAAGAAACTGTTGTCATTGGATTATAAAGACTTGGCAA
TGACATTTTTGTGCATTGATGCAAAGCTTGAAAATGCATCAAATAACACTGACAACCATCTGCATCAAATACAATAGGAT
AAACAAAATGCATTCTTACCTTCAAACTACCTCTGATGTGCCGACACATGATGCTAACAATCTCTTGGTTTCATAGCCTC
TTTGTATCTGTGCCTAACCAACATACTCGTTATAATCCATCAGGGGCGGTTTATAATAGCTCAGACCACCTTGATAAGCT
AATAGCTCAGGGAAAGCTGTCTCTGATCAAAGTTAGTTCAATATATCTAATCTAGACATCTAGTGGCACAAACATTAAGT
TGTGAAATGCATGAGGAAAGGATGAGTAGACAATTTTTTGGAAATGACATCATCTCTGTATTGAGCATACTCAAATTCAA
CAGAATTTAACACCTTATAAGTAAATCGGCCAAACTGGTTTACTAAATTTTGACATTGGTAAAACAAATGGTTCCAACTT
ACCAGAAAGCATTGTTCCCTTTTGTTCTAGGTGTGCCAAATTGCAACAAATCTTTATCAGAAAATGGCGTTGCACTTGAG
GATTGCCATCAAGACAAGCAGCATAGAAACAACATCTACGGAAAACCACAAGATTGGCACACAGCACTCCTCACCGCCAA
GAATGACGCCACGTGTCACTACGGGTTCGCCACTCTCTTAGTAGTACTCCCTACTGAACTTCCAACATTGAATTCCCAGT
CACACTCCCAAGTGAGTTCAAGAAAAACTTCAAAAGCGGGAGTGAGAGGGAACAGAAGAAGATGCATACCCACATCAATA
GGGACACATTAAACACAAGCTTCAATCTTTGCTAAGACCTCTCTATGTTATGAATTGCAAGTTGCAAAATTTATATGCTC
ATGAATTGTAATTTCAGCAGTAACCTTTTTGAGCAGGAAGCTGGAGGGAGAGGCTTTCCATGGGGGTCGGGCCATGCGAC
GGATGTCATCGCTGATTCAACTACTAGGTTCATTCTGCTGATCATGTCACATCTCGTCATCGCCGTCTGCAAAGCCAATG
AGTGCACCCCTCAGGCCTCAGTGTTGGCATGCTGTGCAGATGCAGTTGCACTGTGTACTACCTGTGATGCAGAGGTTCAC
TCTGCAAATCCACTTGCTCAGAGGCACCAAGAGTACCTGTGCTACCACTCCCAGTTGCCTCTGGTTTAATTAGGCAGAAG
CTGCCCATGGAAGCGAGGAAGATGAAGTGAACTCTTGGCTCCTGCTCAGCAGAGGTTCTGATGACAGAGGTTGTACACTT
GTACTGACTCCAAAAGCAATAACAGGCATATCGGGACGGGCTGATGGTGTGAAAAATTAGATGCATACATAACATGGACA
CAAACTTCTAGTGATTAAATATCACTATCAGGTATAGTCTTAACATATATTTATTGATTGAGTATAACTAGGCAGTTCCT
TCAAAATATGTATTAACCAAAAACTAAAGGTACTTTGGCTAAAAAAATTAAAAGTGTGCAAATACATGCAAAGGTTCCAC
AGGAACTAACATTGACCTAGGATAAAAGGAAGAAACCAACAGGACATTGAAATAGTTCAGAAACCAATATGACAATTTTT
GCTTCCTTACCTTAATCAACCAATCCATCTTGCTTAAAGCTTTGACCATAAATTGTGCGATTCTGACTTCCAATCATTTC
AAATCAACTAGTAGTTGAATATTGATTCTTTTTTAAAAAAAAGGCTCCTGCCCTTCTCACTAAAAAAGGCTCCTCACTGT
ATTCATTTGGTAATTTAGTATAACTGAACTAAAATTCCAACCACTAGAATCAATGGCAAGATCACCTTACAACTTATCCC
CCTAAACTAATAAATAAATGATCGGAATGATTGAGGAAAGAAAGAGAATGTCGTGTATACTGATTAGTCATGTAACAAAG
CAAGACCAATTTTCACTATGGTTTATCAGATTGTACTGGAATCTTTGAACAACTCCTTATGTTACTTTCATATAACAGCC
ACGCCATAATGTTTTAATAAACAACTATTCATGGTGCGTACAGTTACACAAAATAAATTGTGAACATGACATTGCCATGG
GTGCCATCAAACTATAGCTAGGGAATGTATATTGTTCTTGTGCCTAGTGATGATAAATTCCAAGATTCTGAAATAGCAAA
GCTATAAAGAATTGAAACTTTGAGATACAACTAATGGTTGTTCTGGCAGAAGATAAAATCCGCAGAAGATGATCAAAGAT
TAGAATGCTGCGGATCCAGGAAAGATTAATAGGAGGGTCTGAACAAACTATACAAAATTATAGACCCCTCTAATAGATGT
ATGACAGAAAATGTTAGTGGGGTCTTCATGGGGTCTCCCATGGTTACAATACAGGTAGTGGGGCCTCAAGACCCCAGAGA
CCCCATGGTGGATCTGCCACTGAATGCTATATAATTCCGAAGAAATTTTAACTTATGTGGACTATTAACATAACAGGCAG
TTAGTGCTTCCTATCTCAAAGATGATTGACAGAAATTATGATTATATTTTACAATGTTAACTACAAACGTGTATAGGACA
CCTGAATGTAATATCTTGGTAAATGCAGTAAAGAAATATAAAATACCTTTGTAAAGGGGACACATTGTTATATGCTTCTG
TACTATCATATGTAAAAGGTCAACCTGCACTTTAGCTCTAAGCAAGGTTATCAAATGCAATATACTGCAGTGCTATCATG
AACAACTTGATTGAAAGGTTGCATGGACTGAGCTGGTAGAGGCAGATATGTGCACAACTCATGTTTTTCCATTAAGTACT
GCGTAGATACTATACAGTATGGGGAGTATGGTCGCAAGACCGAAACTCAAAGGAATTGACTTGACATAAGTTTACATAAA
TGAACAATGCCCAGGTGACATCTATCTATGATGTTCATCC