| Basic information from miRBase |
| hairpin accession number: MI0002407 |
| Located between position 1528134 and 1528370 on chromosome 4 strand - |
| mature miRNAs for MI0002407: |
| ath-miR447a (MIMAT0002113): TTGGGGACGAGATGTTTTGTTG |
| ath-miR447a.2 (MIMAT0020345): TATGGAAGAAATTGTAGTATT |
| References |
| [1]Allen E, Xie Z, Gustafson AM, Carrington JC, Cell. 121:207-221(2005)., "microRNA-directed phasing during trans-acting siRNA biogenesis in plants" |
| [2]Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC, Plant Physiol. 138:2145-2154(2005)., "Expression of Arabidopsis MIRNA genes" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [4]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
| [5]Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD, J Exp Bot. 62:1611-1620(2011)., "MicroRNA activity in the Arabidopsis male germline" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TTTTGTTGCGAGAGTAAATGAAATTTCAGATGGACTCTCTGAAGAAGAGAGGGAGAGAGTGAATCTATATGCTATGAAGG
ATATAGATGGAAATACCGCTCTGCACTTAGCCTTGAAAGGCGGCCATTTGAAGACAGCTGCATGTCTGGTAAAGGCCAAC
CACCTTGCTTCGTTTCTTGCAAATAACCATGGAGTATCTCCTTTGTTTACGGCTATAATTGCTGGAAGTCTAACCCTAGT
GGAAGCAATGATGTACGTTCCTGGACAGACATGTAACTTGGCATCAAAGTTAGAAGGGAGAAAGTCGCTTGTACACGCGG
CTCTAAAGGCCAAAAACTCAGGTTTGTGTTTCATCCAGTTATTCATTTTTGCTTGCGAGAAAAAACTAATTCTAGTTTTT
CTTTCTATCACATTTGCTTCCTCAAAAAGATAATCAAGTATTTGTGTGAGCAGATATCCTTGATGTTATTCTCAGTGAAG
ACCCAAGTCTTGTCAATGAACGAGATGAAGAAGGACGGACCTGCCTTTCAGTTGCAGCATACGTAGGGTACTATAAAGGG
GTAGTCAATCTCTTACACCGATCAACATCAAATGTCTTTGAGTGTGATGATGATGGTTCCTATCCAATCCACATGGCAGT
GGAGAAGGGTCGCGTCAAAATTTTCCTAAAGCTTCTCAAGTGTTGTCCCGATTCACAATACCTACTTAACAAACAAGGTC
AGAACATTCTTCACATTGCGGCAAAAAGTGGGAAAACTGGAACTTACCTATTACAAGTCATCAAGGCTTATGATTTGATA
AAGAATGATCTGATTATGGAGCAAGATGTGGATGGGAATACACCTCTGCACTTAGCCACCTTAACGTGGCGTCCTCGAAC
TGTTAATATACTTAATAAGTTCACTTTGGGAAACCACCTACATATACGTAACAAAGATGGCTTGAGTGCTCTGGATATAG
CGGAGTCGAATCTGCAGTCCAATTACGTCTTTCGAGAGGTATATCTGTCTGTACGTTATTTTGTTTTTGATACAATATAA
AGCCTTTTCTCTTATTTCCATTTGTTCATCTTCTTTGGATAACAGAGAATGACGTTGATGGTCTTATTGTGCACTTGTTC
GCCAAGAGGGTTTAAAATGATACCCACAAGTGGAATAACATTAAAAAGCAGATCAGAAAAAGTAGCCGGTAACAAATACA
AAGACAGTATCAATGTACTTCTACTTGTGGCAACTCTAGTAGCTACTGTGGCATTTGCTGCAGGTATTGCCATACCAGGA
GGATTTAGTAGTTCTACTCCAAAAAGGGGAATTGCAATTTTGGACGATGATGACTTCCTCTCGATTTTTCTGGTGTTTAA
CACATTGGCGATGCAAAGCTCTGTTCTGGCAATAGTTGCTCTAATATGGGCACAACTGGGGGATCCAGTACTTGTTCATA
AAACCTTTCATTTGGCATTGCCAGCACTCTTTGTTTCTCTAGTTTCAATGTCCTCAGCATTCTTCTGCGGCGTGGTGGCT
ACAACAAAGCACAATCCTTGGCTTTTTGATAGCATTATCTTTATCTCTATCATCTTCCTTTTTGTGGTAGCTTATCTCCT
TGCCCCTTACGCTATCCCTCAGTTTCCGGGCACTCCTTTTCTTCAAAGAATTACTAAATGTTATCTCGACTTTATGTTGT
TGTTTGTTAATGAAGATGATGTTGATATTGTCTGCGAGAAGAAGCAGGAGACCGTCCATCTTTATGTCGCGAACTAAGTC
GAAAGGTAAAATATCCTAAAAAATGTCTTTAAAGAAATAATATCATTTCATCTGTTTGATTAAGATGTTGTTTAAACGTT
ATTGGCTTTTCGGTGTTTCGTGATTTATCTATGAGTTTTTATTTATGGTTTCCATCATTCCATGTACTCTATTTTGTCAA
AATACATAATATATTGTGTGGAGACTCTCTAGAGCTAGAGAATGGAGCTTCTGTTGCTATGTTGATTCATGTGTTCAGAA
CATTCTTCACATTGTCACATTAAAACCAAAAACCAAAAAAAAAAAAACATTCTTCACATTGCAGCAAAATGTGGGATAGT
TAGATAAACGGCGTCGCTGAGATAAAAGGGATTACTAAAAACTGGGCCCATTTGTGTTAAACTTTATAGGCCCAATTGTG
AACACCACGTTGAGTTCGACTTTTTTAGTAGGCAGTTGTCCAAATTATGACAAAAAAATAAAATAAAATAAAATGGGCGG
TTCGGCTGAGACAGCTAATCGGGTATTTGCGGCCGTGTGATGCCGCCGTACAATTATATCCATGGTCATGGCTCATCATT
AGTCGCACTGCTCTCCTTTTCTCAAAGTTTAAATTCGACATTTGGTAAAATGATGAAACCTCGATGGAACTGCTCTCTTT
ATGGAATCACGGAATGGACAAATAATCAAAATCAGAAATCGAAGCGAAAAGGGAGGAGAAAAACGCAGATTTGGAGGATT
GGGGACAGATTAGATACTGTTGAATGCATCACTCTAATGCTATCAGCCTATTAATAGCGTCCTATATTTTCGAAGACTTT
TAATGTTTAGGGTTATGGATTTTTCGAGCGAAGCATGGAGAGATGTTGAATTGGATACTATAGGATTTGGTACAACACAT
ACATATGTTCTGCTTCTGCAAAACTAACATATCAAGTTCAGAGAAACCAGTAAGTCGTTGAATATTTTATTATCCATTCA
ACGCTTTCTTCTTTTGGATCATGTCTTGTTTGCTTGACCACTTCTTCTTGCTTAAGAGGATGGACAATATATAAAAACTG
GAGCCTTCTTTTTCTATGAATGCTTATCATCGCGGAGTTGATCTGTTCAATTCACCTGCCATTGGATGCTTTTTTTATAT
ATACTTCACTGTTCAATTTCAGATGCTTTAGAAGGTTTGCGGAGTAGCTAGAGAATCTGGTATCTTCAGTTCTTCAATTT
CAGCTACTTGGTATCAGCTTCGTCATTGTATATCAACACA