Basic information from miRBase |
hairpin accession number: MI0000210 |
Located between position 10578635 and 10578772 on chromosome 4 strand + |
mature miRNAs for MI0000210: |
ath-miR168a (MIMAT0000198): TCGCTTGGTGCAGGTCGGGAA |
You can find this miRNA in EMBL: (accession: AJ493652) |
>promoter (3kb upstream pre-miRNA, by PMRD):
GCATATTCCACACTGATTCATCTAGTTGTAGCTTAAACAAGAAAGAGCAATGAGATAATCTGTAGTGGCTTTACCTTGAT
GAAACAGAGAACCGATCCGAGCAAAGATCCTAATGTTCCAAGAAACGTCATAAATCGACAACTATAAATGACCTGAAAAT
TTCAGTAAATAATTTTTGAGTCAGTTTCTATAATTCATTGAGCTATTCATACCCCTAAAAATCTACAAAACTCAGCTTCT
CCAAGATTTTGTCTAATATCAATCAATATCATGATCATTGAAACCAACTCTTTTACCTAACCCTTAAAAATCTCAGCTTT
ATACAATGAAACAGAACCATTCAAATCCCTATAAAACTCAGCTTTACCAAGATTTCGTAAATCTGCAATCAACCCATTTA
CCTTCTCAATCCCCTCTTCTAAAGCTTCAAATCTATTCGTAGAATTCGATGTTACAGCCGCAGACGTAGACGTAGACGCA
GACGTAGACGTAGACGCAGACGCCAATCTTCCCGGAGACCTATAACTCCAACTCCAGTCAGAGCTCGTAATAGTCTTCGT
CGTCCTCGACGGTAGTTTCAAGCCACGAAAGCTTGATATAACAAGCCTCTTTTCAATCGGGACGAAATCACGAAACCCGT
TAAAGATCAATCCCGAAGGCGACGGTGCGGCGATAGCATTAGCGTTAATGGTCCGGCACGGCGTCGTCATGGCTGCTTAG
GGACGAATCGTGGTTGAGTCAACCAGGTGTGGTAAGAAGAGAAGAAAAAGAGAGAGTGATAAGCAGAAACGTGTCAGCAG
ATTGGGAATGCGCCGCCGTGAGTGGAGTTAGTTGTACGGTCTCTTAGAGATCCACTTGGACGGTAATAACGGAGGAACTT
TCTTTACACATTTTAATCACGCGGGTCTTTTTTCAATAAATATCTTTAAACAATCTAAACGCAAACGTGGTTTTGTACAA
ACGCAATTACAGACAAAAGAATAATATAGAGAATCTAATGAGGAATGTCCGGTTTATTTTTTTGGTTTCTAAATTGAATG
TTCATTCGTTTTGATTTGGTAGGATCTAGATTTTGGTTTAACTCGGTTTATTTGTTTGGTTCAATCTTTAGACGTAGTTT
CATAAACGCAGATTCAGGTACAAAGCAAATATTCTACTATGAATGTACATTGGTCAATCAAGTTCGGGTTTTAGGTTCGA
ACTCTTAAAAAAATTCATTTCGTAAAAACCGAGTATTTAACGAGCACAAAAATATCATGTATTCATGTTGAACACACAAG
AGCTCATTATATTGAACGAGCCAACTTTGTAGCATAACCATCGATTGAAAATCATCTCGAGAATAAGAGAACGGTTAATA
TCTAACTTTCATTTGTTTCACAAAAAGCTCACGCTTAAAGTTTTAGCTCTTACAAACTTTATGTAGAACAAGTTGATATG
TGACAATCACAAATCTAGCTAGTTTTAGTACTTACAACGTTAATTTGTCTAACAGAAATCCTTAATGTTTATGCTTGTGA
TGGTTCGATTCAATATTTTGCATGACATGAATGCATATGGAACCAGTCAATCTTTACCTTTTTTTTGCTAATGTTCTTGT
CTTCTGCCCTAAACACCCCCATTACTTCTGCAGTTCTGCTGGATGTTGAATTTGTTTCTCTTTTTTTTTTGCAAATGTTC
TTGCCTTAATGTTTGCGATATTCACGGAACTTCTTTTTCTAAAATTCTCAGATGCAACATATATAAATTTAGTTATGCAA
TGATACTTAGAGATATTCTGACATTTTAGGAAAAAAATTGGAATTTGTAATGCTGCATAGTCAAAAAGTGTAGCAGAAAA
TAATGTAATGGGAATTGTCAATTTTAAGATGAAGAACCATAAACTGTCGGCGCCGTAAAAGACTGCAAAATACCATAACA
CATTCACATACATTACGTTGGTCTAGAATCTATACAATGAAATAGACTGAGCACAATTGTCTATTATCACAGAAATAGAA
TCATATTCTTACTTTTATATTTTAATCAAGAAGAATTTCAACGTGAAAATTTGGTGGGCATTATTATTGTTCACGAATAT
AATAACAATCTTCTGAATATCCGCTGTTCTAATCTTTTCCAAATATTCCGAGATAAAGAGCAGTAAAGGTTATTCATTTT
GATCAAAAAATGGGACTGTGATACTTAAATTCAATAATGGAGCATTTCAAGTAAAGTTGTTAATTTTATTATTCTCTTCC
CCCATTTTCTTATCTACTGTTTATTTCTTTATTATGTGTGTGTTTTGTTTTTTCTTTTATTTTATTTTCTTCAATGTTAA
GGCAACAACTCTCTTATAACTTACTTGTTATTATTTTAATCCAACTAATTTTGTGATTTTAATCCCACTAATTGTTCTTA
TTTTTGTGATGATTAACTATTAAATGATCTTTTTTACCGCAAGGATAAGAGATTACCACCTACAACACCCATGTATTTTC
TCATCTTTTTGCAGGCAAACACATTATTTTCACAATAACCCATTTTTAGAAGAAAATATAAACAATTAAAATATTAACAA
CCAGGATAACTTTTACATAAGAAAGTCAAAAAAGTGGGAGACGCAGAAGAAGTCCACGTGACAAAAGTACAGATCACGCT
CACGTGGTTTACGAGCGTAAGCAAATGGCTTTTTCCGTAATTTCATCAAAAGAGAGAAAAAAGGAAGAAAAAAAAATCTA
ATCTTAAGGTCGGAGAATTCATCTTCTATCATCAAAACAGTGTGAAAGCGAAAATCTCTTTCAAGAGAACACGTGTCGGA
AAATGAGTGGTCGTAACCTGTATTAAATACCCTACAGAAGAGGCTAAGGTTGTCTCTGCTTGATAGGGTTCCCTTCTTCT
TCTTATTACATATCATAAACCTCATTTCCCCATTACAAAACCTAGAACTCCTTCTCTCTTCTCTTTCTTCATATCCCTGT
CTAAAGGGATTATTATGATAGTAGAGTCTCACCATCGGGC