miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001158
Located between position 30385671 and 30385770 on chromosome 03 strand -
mature miRNAs for MI0001158:
         osa-miR166n (MIMAT0001088): TCGGACCAGGCTTCATTCCCC

References
[1]Li Y, Li W, Jin YX, Acta Biochim Biophys Sin (Shanghai). 37:75-87(2005)., "Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa"




>promoter (3kb upstream pre-miRNA, by PMRD):
GTCGGAGGCGCTGATCGGGTCGCGGCCGCCGCGGTGCGAGGGCAAGTGCGCGCCGTGCGGGCGGTGCGAGGCGGTGCAGG
TGCCCGTGGCGCCGCGTGCCGGCCGCCTCCGCGCCTTCTTCTTCTCCAGAGCCGCCGCCGCCGACGACGACGACGAGAGC
TCCACCAACTACAAGCCGTTGAACTGGAAGTGCAGGTGCGCAGACACCAGGAGGGCGCTGGATCCATGATCAAGAAATGC
TTGAGATTTTTCGCTCCCGGAGATGGTGAAATTAAAGTTTCTGAATTCCGTTAGTAGTTGTTGTTATGGCTTTAGGTGCA
GAGATTCAGAGAAACGATTCTGAAGGTGTTATTATACTCTGAATCCATTGTGTTCTAATTTTGTAGTACTATGTTTAGTT
TGTGGTGTAATTAAGTGTGTCATGTCCATTTTCCATCAAGAGTTGGATGGATCAAAATTCCAAGCCTGCATTTCATAATT
GAGTGTTTTTTTTAATCCCTTCAAAATTCAAAACCAAAAGTTGTCAAGATAGTACTTACATTGTCTTTGCTACCAAGCTT
AATGTTTGGTTATCTCGTTCTTTATCAGCGAGTTAGCATCTTAACAACTGCACTTATATTGTCTTTTCTACCAAGCTTAA
TGCTGCGCACATTGCCTGCAAAATATTTTCCAAGAAGATGCAAAAGCAATGCAGCATCGCATTGTCCGGTAGTAAGACAA
GAAAAACTTTTGTAGTACTGGACTTGGATGTATGCTCATCATTGCTAGTGCGTCTCTTTTGTTTTGAAGGAAGCCGTAAG
CATTTGATACACTACCAGGGCATGTCCTTTCAGGATTCGCTTCTGAAAACTCGGTGAAAAAAGTTGCACCTACTATACAC
TTCACACTACTACCACTAGTACTAGTAGTACCTTGGTAGGCAAACATGAACAGTTGCACAGTACAATCTGTTTCAAATGA
AATTGCACGGTAGTAGTACAGGTTTTTGGCTCACATTCAAGGCTAAACGTACAGCTATGCATCATCTCTCTACAGTTTTG
CACAAATTCAGCTATTGCCTCGGCGCCACCACTGAAATTTAGCACCAAGGTTGGTAGCAGTAGAAATGCGTGCGTGACTA
ACTCAACAGGTACTCGATTCAGCAATGGCCACTGCATTCAACTCGGATGCTATCACATGCAGATCAATCTTTGCCTACCT
CCATGGGTGCAAGAAAATGACAGTGCTGAATCCCCATTGAATACTTACCCATGGGAGGGCATCCACGGACCACGGTGTGA
GGGCGTTCACAGTGCGACACAAAACATTGCTGATAGAAAACGAGAGAGTAACCCAGCTGATAATTGAGTTGATCAGAATG
GTGCCTAAGTTGTTCTTGTATTTTAGTCCTCTATTTCTTCCGTTTGCAGCATCTTGTGTTGTCTCGTATTTTTTAATATA
TATATATATATATATTGGCTAAATTTTAGTCACTAGATTAACAAGATCGATCATTTTAACAACTCTTACTTTTAAAGGGT
AGGCGAAAACCTCTTCACATAGACAACTCAAACAACCTAAATTTAGAACAGGAGGAGTACTCTCTCCGTTTCACAATGTA
AGTCATTCTAGTATTTCTCACATTCATATTGATGTTAATGAATCTAGACATATATATCTATTTAGATTTATTAACGTCAC
TATGAATGTGGGAAATGCTAAAATGACTTACATTGTGAAACGGAGGAAGTATATATTAGTGGCAAATTATTGTCCACCGC
GGCGGCTAAAAATTGTAACCCTACAAGTATCTGATCAAACAAAGCCAAGAATATCGGTACTGTAGCCAAAGCAGTACCCA
CAAAACAACAGTTGGAGTTGCCGGGCCAAATATCGACCGTAATCGACCCCAGCGGCCCAACCTCAGGCCGTATCGCCTCC
ATAATCATCATCATTCATGCATCTGTCGTCTCGCTTAATTGCCATCAACTTCACCTCACAAAAGTGAGCATCAAGAACTC
TGCATTTACGCGATGAAACGGCCGCATTCGAGTTTTCCATCGGTAACAACTATACCATGTGAGGCCTGAGTTGAGCTTAG
GGGTGGAAACGAGCCGAGCCGAGCCAGGCTCGGCTCGGCTCGTGGAAGCTCGCGAAATGCCAGGCTCGGCTTGGCTCGGC
TCGGTTCTCCAACCGAGCTGTACATTAGGCTCGGCTCGGCTCGTGGTCTGGCTCGAGCCGGCTCGAGCTGGCTCGTGAGC
TTTGCAATAGCAGCAGTTGTATTGCCAGCAGCAGTTGTGTTGCTTTGCAATGACTTGGTTATTCAGATAATAACTCTCAA
GTCCCTACAAAGATAATTAGGTATATTGTATGCAGCCAACATATAACAAATTGATGGGATTTTTTGGTTTTCGGCCAGAA
GTCTTTCTATTCAAACCGAGCCTACTAAGCTCGTGAACTGCTCGCGAGCTGGCTCGGGCTCGGCTCGGTTCACAAACGAG
CTAAAACCCAGGCTCGGGCTCGGCTCGTTCAGGATTCGAGCCGAGCCGAGCCAGGCGAGCCCGAGCCGAGCTTGAGCCGA
GTTCACGAGCCCGAGCTATTTGTCCAGCCCTAGTTGAGCTCTCTCTTCTCCCAAATAATAAGATTACTATTCATCACCTT
TCTAGTACGCGGAGCAGCAGACTACAACCATGCCACCATGGCGGAGTCACTGCAGTAGCACGTTCCAGATCATCATTCTA
TAGCAATTTTTCCAGCGAATAAAAGGAAATGCGGCAAATTACATCGTTATCTTCATTAACTACATTTGGATTATTTCCCA
AAGCAACATTAAATCTAATTAATTGACAGTTGTATGGCTGGTTGGCCGGATGAAGAGTGGAGATGTAAGGTCACCTCTAA
AAATGTTTTGGCACGTTGGGAATGATGAGTATTTTGATAAAACAAAAATATATGCTACTCCATCCATTCCATGGCACAAC
CACTTTTTTTAACATGTTAGATAATACTCCCCCCATCTAC