| Basic information from miRBase |
| hairpin accession number: MI0002222 |
| Located between position 22785312 and 22785417 on chromosome scaffold_5 strand - |
| mature miRNAs for MI0002222: |
| ptc-miR166e (MIMAT0001928): TCGGACCAGGCTTCATTCCCC |
| References |
| [1]Dezulian T, Palatnik JF, Huson DH, Weigel D, http://genomebiology.com/2005/6/11/p13 (2005)., "Conservation and divergence of microRNA families in plants" |
| [2]Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm, Science. 313:1596-1604(2006)., "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CACATTCAAGCTTAACAAACAAAAAGACAGGCAGATGTCTTGACTTGTGAGTTGGGCTTTCTAAAGAAAGCAATTGAAGA
GGAAGACCTGGCCTTTTGTGCTGTCTTGGGCTACTCTGCTTGCTGTCTGTTGTTTTGTTTCGAACCTGTACTGTATTCCA
CACTTTGTTAGAGATGGTTTGCTCATTTCTCGAAGTTCTGTCAAAACAAGCAGCTCATGGCTTGAAAAGCACATCAACAA
CCAAATCATGACCTCTACTCCAATGAGTTCCTTGTTGAAACAACGCACTCTAAACAGCAATTTGCACCAACTGGCTGTTT
TAAGCTAAATCCAGATCTTTGTGAGCAACAAGAAACCTATCTGTGCAGAGGGACCTACTCATTAGTTGTACTTCTCGTGA
ATTATTTCATAATAATTATTGCTGGCCTAAGTATGCGACACCCTGCCGAGTAAAAGGGAAAGATGCAACCCTGCTTTCAA
CAGGCACCATTGTAGAAATGTTCTCAATTGTGAACAAGAAATACATGACACCTTACCTTTTGAGAACATGAATGCTTGAA
ATGTAGAAACAGAAGTCTATTACAAAAAGAGGCTTTGACTTTTTAATGTAATTAATCTGTACAGAGCCAATGATTCCCGT
TGCTTTTATATTAGCTCTCACTCTAATGTGTTTTAGGGCGATAGATTTATCAATCAATTGTCGTTTAAAGGTACATTATT
ATCAACTTTATTATTCTGTCATCATTTCCAACAATAAGGGGCCCCAAAAGGCCTATTTTGACTCCACATTTTGCATCTAA
GACTGTACGTTTTTCTTCATGATAGATAGATTTATGGGCCAAGAATCGTTTGGCTGTATGTAGGAGGTGTCTCTTATTGA
TGCTGAATTCTATGATGGAACTACGCAAGGACGACTACTGTCCACAGTAATATAGGATAGGGTACCTTAGCTGGATCTCA
TAATTGTTACTAACTTGTCCGGCTTTGCTACATGATCTCTAGCTACTTAAAAGTGGGATCGAACATGAGATACAGGGATT
TTTATATGCTTTAACTGTGAACAGGACATGTTATCTACCGAATTGTGATGAACCGCAAAATATCGATGACAATTAAAAGA
AACTAGGAGCATATCACCAATGCATTTTGTGTGTGGACACAACTTGGCTTGCCATTATCTGCTTTAAAGATTAGCAGTAG
CCTTTCACAGTCTGGCGCCAGCAACATAAGGTTGATTGAATGAATTCAGCTTTTGGAATAAAGGAAGATTTGCTGAAAAG
AATTGCTTTGATATCTAGTCCCAGAAACAAGAACTGAGGGGGCTTGTCCAACTTTTCTCAAACTGAGATTACACACTTTG
ATCACATGTACAGGATGCTGCCAAGTTCCCTTGTCATAAAAAGAAGTGTTATAATAACATGGTTATAGTTTGGCACCTCT
TTTCTGCTTCAGAAGTAATTAAAGCACCACAGGCTTCCCAAATTCAACATTTTAGAGAAGACAAACAAACTAATTTCTGC
AAATTAAAGTCTAACTTAATCAATTACCGATCGATGAAGCTCAGGTCTTTTTTTTTTTGGTGGAATCAAGTTAAAGTTCG
CCAGTCAATACTTCATGTTCTAATAATCATTCTTTGATTCCTTTGCGTATATCGTAGGTAACTGATGATGAAATATATGC
TCCCAGCTCTAGCAATATGCTCTGAAGTTCAATTATTCAAAGTAATATGCTAAATAGACTGCTTTATTTGGCAACAAAAT
TCAAGCTGTCGGTTGAAACATTGGGTTTTATCTTTACTCGTCACTTTATAAAAAGCAACTTTACCTGCAGCTACCTTGGG
AGAATTTCAAACCTGCTAGTCTTTTACATATTCATGGATTAATTAGTCATATGCATATATACCCCTTTATGCAACAAATT
AATTAGTGACTGATCAGTACTGTGATTTAACTAGTTAGTGACTTGGTTTTCCACTTTCTTTTGTCCATTTCTCTTTCTTC
TTTTATTTTTTTTTTTTGTTGACCAAAGATTACATCTTTAAGCAGTTCAGGCCAATCCGTGTTGGACTTGGGACTTAAGC
TTGGCATCGTACAAGCTCCATATGCCATCATTTATGAAGGTTCTCCACCTCCCACCTTCCCTTTACCTTAGTGGCAAGCA
AAAGACATGTTCCTTACTTGGCATGAACACAAGGGTCAAGGTCTTGCAAGCAAGACTCTCTAAGACTAATCAGCTCCATT
AATCACGGATATCTAACTAAAATCATGTTTTGTTTTAGCAGGTACATGGCTGCGAAGTACAGTTCGATTATATAAGAAAA
ATGTCCCTTCCGTATTAATGAACATTAAACAACACGAGTCCTTCTATGGTGCCTTGGTTTTTTTTTCTTTTTTCGGCTGC
AGGTGACTCTGGTTAAAATTAAAGGCACTGTCTTTTGCGTGTATTAAATGTTCTGGACTATATATGACCAAATCTATTTC
GAGAAATCAGTGTACAGTAAGTACCATTGGAAAAATGACATCAATTTCGTTGTAGGATTTTCCTAAGCTGACAATCCTTG
ATGATCCGATGTTTTTAATGGGATAAGCTAGACGGTCAAAACGCTTTGTTTACTGAATCGGTTTGAAAGGAAGCTGTTGA
ATACTTGAATACACAGACCCCATATTGGTGTCGGAACCCTAAAAGAGGCTGTTTGGGTTGACCTCATCATCGAATGCACA
CACTTACTGTTAAGACAGAAATATTAATTATCATGTTCGAGAAAAAAGAGTAATTAAAGTTAACTCACTTCTGCCCAAAA
ACACGTTTACCTACGTGTGAAAAGCTTGGTTAGGGGTAGTGTAGAAAGTGGATTCCAACTCCATGTCATGTGACTCAAGC
TCGAATATCTTTATCATCCCTACGTATATAAGGACCCCATGAAAAAAATAATGCATGGCCAAATCAGAAACTCCATGATT
TGTCTCTCTCCCCCTCACCCCATCTCTCCCTCTCGCGTAT