miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001157
Located between position 23042643 and 23042842 on chromosome 08 strand +
mature miRNAs for MI0001157:
         osa-miR166m (MIMAT0001087): TCGGACCAGGCTTCATTCCCT

References
[1]Li Y, Li W, Jin YX, Acta Biochim Biophys Sin (Shanghai). 37:75-87(2005)., "Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa"




>promoter (3kb upstream pre-miRNA, by PMRD):
TATCTAACCTCAATATTTATATTTGGGATGAATATAACAGTGGTGTTACGGGAAAATAGGACAACGGAGATAGTGATACG
GTGCTCAAATTAAATGAAGCCTTGAATTCTCCACCGTAATTAAATACTCCCTCTGTCCCGCAATATAGCGGATTTTGAGC
CTACCGGTTTGTCCTGCAATATAGCGGATTTTGAGTTCCCGAGGAGCAGCAGCGACAGTTTTATCGTGCCCCACACTGTC
CTATACAGAGAGAAAAAAAGGGAAAGATTCCCACCACCCATCCACCCACATACGGATAGAGGAAAAAAAAAACTCGCAAC
CACATCTCACGCTCTCCCCTCTCGTTCGCCATCGAAACAGAAGCGGGGAAATCGTTTCTCTCCTTCCTCTTGGCGCGATT
TCCCTCATCCCTCCCGGCGCAATTCCACCCGTCCCTCTAGGCGCTAGCCGCCGCCCCCCTCCCTATTCCTCCCGGTGGAA
CATGTGGCGCTCCGACCCTCTCCACACCCCTCCCCGCGCCGGGATTCGCCGTGGCTTTCCTATGCCGTTCCCTTCCCAGG
ACAATCCTCCTGCAGCCAGATCCGGCGATTCTAGGCCGGTAGAGGCGGTGGGGGGTGGCGGTCCAGCTGAATGGATGCGG
GGACCGGTGTTGGAGGGAAGCGGCTCGGATCCAATCGGCGACATGCAGCGGCTCCTCTTAGGGCTGCAGCCTAGTAAGAG
TGAGAAGCGACGCAGGATGGCGTCGCGACCTGGCAGTAGCGAGAAGCGGCGCGGAACTTGGTGGAGTCGTGTTGGTCGGT
ACCCTGTTAAGGAAGGTGTAGATTTTGTCCCGAATTCACAAGGTGAGATCGGTGACGAATTCCTTTTCGTCCCTGACTCT
GGATCCGATGAGGAAGAAGTGGTCGATGGGGATAGTTGCGAAGTCAGGGAAGTTGATTTTGTACCTGATTCGCAGCCGGA
GGATGCAGACTCCGTGGAGAAGATTGGAGTAGGTGAGGACCAATCGAGAGGCGATGTGGCCATGCCAAATCCCCCATCCG
ATCCACATTGCCGGCGAAGGTTCGTCACCAACTCTGTCTTCAAAGGCCTGTTGAAAGATCTTGCGCAAGAGGAGAAGGCA
AGAAGATCTTATTTTGAAAAAGCCACAAGACAGGAGGAGGATGATAAGGCAGCTAGAGAGAAGGATGATAAGACAACAAG
GGAGGACAAGTCTATGAAGGCAAGCGACGATGACGAGAAGGACAGGGCAATCAGGGCAAGCGGTGATGACAAGGGTAATA
GTCAATGTGTGGGCTTGGATTGGCGCGACCATGGGCAAGTCGACGACAGTGAATTATGGTAATGGACATGCTCAATCCCA
TGTGTTCATGCGTGCTTATGTTATTATGAATTAAATTAGTGATGAAATGGTAGTAATAGTACTTAGGATGCTAGCTGTTA
TGGTTAGTTCGTTTTGTTCAGCTTGTCCTAGTAACTTGCTTGGGTGAATGTTGGGTGTTCGACTTTTGGCAAAAACTCTA
GCTAAAGCTATGTGCATGATAGGTTGGGTGTTGGCTTTTGGCAAAAACTCTAGCTGAAGCTATGTACATGATAGGTTGGG
ATGAAAACTGCGTTGAAGTGTTTGTAGATTAGCTGTTAGATTGGCCAAGGCAGGGCAAAAGTTTATTATGTGTATATTTA
AACCATGTAATGCACTTCTTTTTTCTGTAAGTAATGGTAGCAGTCCATGGTGTCCTATTTGAGATGATGAATCAAATCAT
GCATGTGTGTAGAATGTGCAGTAAATCATTCTTCTTCTGTGTACAATGTGCATTAACACTACAAGAAATTTGATGTTCTA
GCTGAGAGAAAAATCACTGAATATCTGATTTCATACATCTTCATCAATGCACTATAACCAAACTAATACTATTTTGTTGT
AATATATACTACTAAGATGACAAGCTGTCAACACTGAAGCCAAAATATTTATCTACTATTTCAGGTTCCCTAATCTAAAT
ATTTATCCACTATGATAGGTTCCCTAATCTAAATGTTAGTGGTATAATACAAAATTCTCATGGCTAGCTTGATTATCAAA
TGATATGTACTCCCTCCATCCCATGATATAAAGGATTTTGGGTGGATGTGACATCCTACTACAATGAATCTGGATAGACG
TCTGTCCAGATTAATTGTACTAAGATGTGTCACATCCACCCAAATTTGATGTTGGGTCTGGTGCATTAGAGAGGATAAAC
AGATGACAATTATAGAAAGTACACTACATTGAGCCTCACGATCGAGGCGGTGAGGAGAAAGCGCATCACAGCGGTGACGG
TGGTGGGAGAGAACGTGATAGCCATGAGAGGAAGGGATGCAGCGATGGGAGAGAGAGTTGCCGGTCGGTAGTGTAAGCAT
GTATAACACAATTAAAACAAATCTAATCTCTTCAAGTACTGAACAAGAAAGTATTGATGAGGTGCAACTACTCCAGATTT
TGCATAACAGTGCTTGCAAAATATAATACAGCTCTATGTACATAAAGGCTGCATCACAACAAAATAAAATCCAAGCCTTT
CTATGCAACCATTGTTCCAACTACTATTCATTTAACTTAAAGACCGCACCACACTTTGATAAAATTCAAGTTCACAAGTA
AGTCTAGTAGGGAGCATGCCAAGCCTTTGTAAGCGATCCTTGTTCATATGGGGTATCTTGTACCCGTTGCCTCCATCAAC
TTTCATGACTTCTATGAAGTAAGATTGTAGGGTTAAGAAAACCCGATTAACCAAATCTTCGTCATACTCATTGTACTCTT
TTTGCACGTTTTCTATAATCTCTTCCATGGATTTAGAATTCTTTAGGAATGTCTTGGATTGAACAGAAGCGAAAAATCCA
AGGTCAAGCACATTCATGTCAGGGGAATTTGGGGGCTGATTTTTTATGCGTATGTCTAGTCCTGTTTGGGCAACCGCAAG
GGCAAATGCAGGGTCATCTGCTGCAATATGTGTTCGTGCA