miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001156
Located between position 32685024 and 32685183 on chromosome 01 strand -
mature miRNAs for MI0001156:
         osa-miR167j (MIMAT0001086): TGAAGCTGCCAGCATGATCTG

References
[1]Li Y, Li W, Jin YX, Acta Biochim Biophys Sin (Shanghai). 37:75-87(2005)., "Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa"




>promoter (3kb upstream pre-miRNA, by PMRD):
CCAAAATTTTTTCCCAAAAACATCACATCATATCTTTGGATATATATATAAAGCATTAAATATAGATAAAAAGAAAAACT
AATTGCACAGTTATAGGGGAAATCGCGAGACGAATCTTTTAAGCCTAATTAGTCCGTGATTAGCCATAAGTGCTACAGTA
ACCCACATGTGCTAATGACGGCTTAATTAGTCTCAAAAGATTCGTCTCGCGGTTTCCAGGTGAGTTCTGAAATTAGTTTT
TTCATTCGTGTCCGAAATCCTCTTTCGACATCCGGTCAAACGTCTGATGTGACACCCAAAAATTTCCTTTTCTCCAACTA
AACACACCCTAACTGGTTCGTTGTAGCTCAGGATCTTTTTGCGTTACGAGTATAGCCAACTATTAGCTCCAATTCATCTA
TAATCAATCTAATAGCTCATTTATATAATAGACTATTAATATATGGTCCCACATCTCATACACACATAACGTATTGGAGT
TCGTGCTGCAGCTGGTTATAAATCTGTAATCCGCTTTCCTTTTCTCTCTTCTCTTCTCCACATGTGCTTACAGTTGACTT
ATATAGTTTGCTATTGTACTCGCTCTGAAGACTTGACACATAGGTACTAACCCTGGTTATGGCCGTTTTTACTACTAGGT
CAACAGGTAGATGCATGGTTCCACCGCCACGATATTTCTGATATTTTACATGCAGAAAGGAAACTCGACGGTAACAGAAT
CGACGACCAAGTGGACAGTTGGAGTACTAGGTGAAGTGGTTAACTCTGCAAAGAGTGGATCCGAAGAAAGGAACCTTCAG
GCACAAACCACTTTCCTACTTGGATTTTCACTTTGGCAAAAGTAAATCCAGCCTTAAACCCATAAATCACAAAAGACCTG
CAGCGTCCTTTCAACAGTCACTTCTAGAAATTTGTCGGCCATTTGCCAATGCAAGGAGGCTGAAAAAGAGTGCTCTCTTT
CATAAAAAAAACTAATATAGTATTAAATATAACGTATTCTAATAATATAAATATGAACATACATATGTTAGATTCGTAGT
ACTACATCACAATATATCATATACAGTCATCACAATATATCATATACAGTCACAAAGTAGTACAGAAGAATTTAGTTACG
AGTCGAGTAAACGTGACTCGACTGCTACCCCCTATAATATCCCGAGCTCTGACATAGTTTTAATCGCCCAACGCCCCAAC
GGTATTTTCTACAGCTTCTTGGTCTCAATCAACGAGGAGTTTGTTAGCTTGTGCACTGTGTAAAGTGTGTACGGAGTAGT
GCATGCTGCACAAGTGCACATGACAGAATATATAATTTCTGGCTCTTCCAGAGATGAGATCAAATATGTACTTTCCAACG
CGATGCAGCCAAACGTGTCCAAGCAATCCAGAATGCAGACATGGAAGTTAATTCAGTGAATTCAATTCACTGCCCTAGCG
GCCTAGCCCCAGAATGGTACTATAACCACCATGATTCCATGAATCACAATACCAAACCTTAAAATAAAAACGAGGACATA
TCCCTCTCATGGCCCGAGCCTGGAGTTAATGTCAAAGCTCGCATGTTGGCGAGCAGAAATGGTCCCTGTTTAGCCAACTT
TTTATGCTGTGTGCCTGCATCCACGCCATGATTAATGGAGTAGTTTGGGGAGAGAGAGATAGCACGAGAGACAGTACAAC
TGCGTTTAGTTTTTGAAATTGGAAAAAAGTTTGGGGAAAGTTAGTAGTTTGGAAAACAAGTTGAGAGTTGTGTGTAGGAA
TATTTTGAATGTGATGTGATGTGATGGAAAGTTGGAAGTTTGGGGGAAGTTTGGTGTGAACTAAACAGGGCCTAGTTGTA
TGACTCATTTGTCACCTGGTTATGGCCGAGTTTAGTTCCAAATTTTTTCTTCAAACTTTCAACTTTTCCATCACATCAAA
ACTTCTCTACACACATAAACTTTCAACTTTTCCATCGCATCGTTCCAATTTCAACTAAATTTTCAATTTTGGCGTGAACT
AAATACACCCTATAATAATTCAATAGCTACTCCCTCCGTCCCAAAAAAAGGCAAACCGTGGGTTCCCGTGCCAACGTTTG
ACTGTCCGTCTTATATGAAATTTTTTTTATAATTAGTATTTCCGTTGTTGTTAGATAATAAAACATGATTAATACTTTAT
GCGTAACTTATTTTTTTATTTTTTTTATAATTTTTTTAAATAAGATGAACAGTCAAACGTTAGACACGGAAATCAAGGTT
TGTCTTTTTTTTTTGACGGAGGGAGTAATTGTTTGGTACAGTACTAGCAGGAAGCAATGGGCGACATTACTTTCAGTGCT
ATTCGTTTTCTTTTATGCCATTTGCTTTGTCATGGAGTTGGTCTTGAGGGAGATCTTAAGGAGTAGGGACAAGGACCATT
TTTCTGGTTGTTTGTTGGCTGAGTAGAAGCTGGGTAGCTCAGCATGTGGGCTCTCTGTCCCTTTTACCTGACTTGGGGGC
GGTGTGCTCAGATCCAAGGGAATCATGTATCCATGTGGCATTGTGGCCTCGACTCCTCGTGGTGTTCCCCTTCCTCCAGG
GCAAGCTTTGTCTTTACTCTTCACCTTTCTCTTGCGTACCCCCACTCCTGGAATGTGGAATTTTGTAACTTTCCACAAGT
AAAAATGTACTCACGTTCAGTTAACAATGTTTTTACTTGCTCCGTTTCACGATTTTTGTCGTCTTATATATATATTTAGA
ATTCATATAAGAAAACGATAGTGATAGTTTTTGTCATGATAAACACTTTATATAATTATATTTCTAATAGTTCTTTTATA
AACATATAGTTAGAAAATACAATAATAAAATATGTGCAGAGACTGTATCAATGACTCGATGTCCAAAATGATCAATGTAA
AGCAGAATTTATGATAATTAAGGTATTATTACAGTTTATAGTGTTTTTCGCTTGTTTCGGTTAGCCTTCAACTTATAAGC
ATAAGTACAAGTTTAGATTTTAAAATTTAAATTTTGATTT