| Basic information from miRBase |
| hairpin accession number: MI0005101 |
| Located between position 19659301 and 19659413 on chromosome 3 strand - |
| mature miRNAs for MI0005101: |
| ath-miR771 (MIMAT0003930): TGAGCCTCTGTGGTAGCCCTCA |
| References |
| [1]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [2]Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC, PLoS One. 2:e219(2007)., "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
>promoter (3kb upstream pre-miRNA, by PMRD):
ACAATGCGTCGGCCCAAACATCTCGTCTGTAATATAAATCCTACACCGTTCTTTTCCAAGACAATTCTGCATAAACAAAA
AATAGTAATCGATAAGAAGATTTATCGTCAAACAAGATTACTAATGTTGAGTAACTTTGTTAACCTCTTTGACGAGTCTC
AAAGTAGCCGGCGCACCGCAGTTTCCACGTTTAAGCGTTTCACATGATGAACCACCGGGCTGACCATAGTCAGCGAATTT
GATTCGAGAAAAAACATATCCTTTGTCGCAAAAAGGTGCATATATGATACCATCCTCTGACGGGTTATTCGACCCGCACA
GAGGATATTCTTTGTCCCGTTGAGGAGATCCTCCGGACTTTGAATTGGAGATATGTTTCGGATCACTATTGATTTTAGTG
CCTCTTGCATCAAAAGAACTGTTGTTGATTTTTGAAGCAAGATTAGAAACCGATGAAAGAAACATAACAAGAAGCAAAAT
GATGAAGCAATGACGACGAAAATAATGTGAAGTTTCCATTTTGTTTTTGTTCTCTTACAAATCAGAAGGATAATGAAAAT
TTCTAAGCAACTTAGATATATAGGTGTGTTTTCAAAATATATGCTTGTTAGATTAAATTAGTATAGAGACGAATTGTGTG
CGGATGTAGCTACGAAGTTTACTATCAATTTTTCCTTTTAGCTATGTTCTAATTTATTTTTATTCTTTATTCACTTTCCA
TACTTCTTGTCTTTCGGAGATGTTGGTGAAGGACATTCATTCTGACTTTTTCGCGATTACTAAAAAACATATTTGCATTT
TCAGAAGATATTTTAATTGGTTCCTAAAAAAGATAGTCTAATTGGCTTTCACATCCCATAGATCTTCAGGCTTTTGTCTC
CCCTAGTTGATTGTATTATTATACTTTGAATATGTTTTTAATTAGACAAGTCATATGTCTTCTTATACATAAGCTTTATT
GTTAGGGTGGGTTTGGTGTGAACATGAAGATTGATCTTCTTCTTAAGGTTTTGAATACCAACAAAAGTTTGATTTATATT
TTTTAGAGATTTGTTAATCTCATTTTCTTCTTATATGAAACATAACTTTTTCTTCTGAAGTGGATTCTTACCAAGTTGGC
AGGTTATGGATTCTTTAGATCGACCGCTTTTTCACAATCTCTACTTCTTTAAGCAAAGTCGTACTATTGGAGCTTTATTT
TTTCACTAAGGACATTGTATTGTCATTTGAATTAGGTTAGCATTCAAAAACATAAGTATGGCGATGGTATGCATTAATGA
ATTGTTAATTTTCTTAAGCCTTTTAAGCTACTCGCATGAACTTCATTTGCAAAGAACCTCTATCGGAGACGAGGAGTTCC
TCTTTGTCGGCTGGTATATCTTCTCATAGATGAATTGGTAATAGCATATTTTATTATAACACTCTTTCTTATGCATATAT
AATCGGTAAGAAAAAGAGTTCAATCAAATACGCAAATAGGAAACAAGAGCCTGATTCAGTGGATTGCCTAATTAGCACAC
ATAATGATGCGCTCTATAAAAGGTTTTACTAAGAAAAAAATATATCATAAATATGATCAACAACTACTTGATAAACAAAA
AAAAAAGAAGAAGAAGACAAAATTTGTTACAAGAATCACTAATTCTTTAAGTAACTTTTTTCTTACAAGTACCGGAAACA
ACGAATCTAAGTGCCGGTCCTTTACAATGGGTTGGACCAAACATCTCGTCTGTCACTGGAAACCAACATTCTTCTTTTCC
AAGTCAATTCTGCGTAAGTAATAACAATAGATAACAATAATAAGATATGATGTATTAGTACTCATTTCAAACAGATAATT
CATATATATACGTTTAGTTAAACCTTTTTGACGAGCCTCAAAGTAGCGGGTGCGCCGCAGTTTCCACGTTTAAGCGTGTT
ATTCTTACAGTCACCAGTGGGTTGGCCATAGTCGGCGAATTTTATCTCAGAGATAACATATCCTTCACCACAAAAGATGG
GCGATAGATCGACGCTAGGCGCCGGATGATCAATGCATATTGGCAGTTGATTCGGTCGATATTCTCTTGGATTTAAACGA
TAAGAACCGTTGATGATATTCCTTGTATAAAAACAAGACACATAAGAAACGGATAAAAGAAGAAGCAAAACGATGAAGCC
ATGACGATGAAGAGAATGTGTAGTTTCCATTTTTATTCTAGTTTTTCGTTCCCTTCTAAATCAGAAGGGTGTTGAAAAAT
GCTAAGATGGTTTAGTACGTGTAGTTAAGTATAAATATGTAATGTTTTGATATTGATATATATGATAATATTAGTAATTA
AAGTTTCTTAGAGATGCGAATTTGTGTGCGGATGTGGCTGCGAAGTTTTCTATAATTAGGTTTATCATATTCCTACGAGA
ATATTAAAACAACTGTTTTTATTTCGCAAAGAGAACAACAAATTTTCACACTATCTATTTTAGAATGTTCAATCTTGACA
ATTTGCATTTATTGCTTGATTATTAATTATGATACAAGTATAGAATATCAAAATTCAAGTGTCATATAATTAGTTTCGGA
TTAGTAAACTTCAATTACCATAAGAAAAAAAAAAGGAAGGATTTGACTTCACATATATTCAAGAATTGCTTCAAAAACAA
AAACATCAATCTTCAGATTTGGTTAGCATATACTAAAATCCAACAATAGATCGTCTCTAGGGTAAAGATACAACAAACAT
TGGTTTACTTATGCATCAAGAAACCAAAAGAAAAGAAACAACAGAACAAACAAGAAATAGACGAAGTAATCATCTAACAT
CGCATCAAGAAAACCGAAAACACTAAAGAAGAAAGAACTTTGAAGATCCACTTTCATTCAAAAGCCCATTGATTCACCTT
GCGGATCTCAGCTTCTCCCTCTGCTGTGAAATCGTTCTCGATATTGAAGTATGAGCGAATCTCGCCTGGAGTTTTGCCTG
AGAGCAAATCAGCGACAGTTTGAAAATGTGAGATCAAGAA