| Basic information from miRBase |
| hairpin accession number: MI0001024 |
| Located between position 14443504 and 14443612 on chromosome 2 strand + |
| mature miRNAs for MI0001024: |
| ath-miR399e (MIMAT0000955): TGCCAAAGGAGATTTGCCTCG |
| References |
| [1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
| [2]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [3]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
AGAATGTAACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATGGGGAGATCGACTTCGTTGATGAG
TCGACTTTATTTGCAAATAGAAAGAAGGGTCATTTCATGAAAGGTGATGCGGTTATTGTGATCAAGGGGGATCTTAAAAA
CTTGAAGGGCTGGATTGAGAAAGTAGATGAAGAGAATGTCCTTATCAGATCAGAGATGAAAGATCTTCCTGTAAGTATCC
AAAATCTTCATCTTTTCATAAACAACATATTTGTTGCTAAAATGTTGTAGCCAGTAAAAGACTGTATTCACTGTTGCAGA
ATCCTATTGCGGTTAATGGGAGAGAGCTTTGTAAATACTTTGAACCTGGAAATTTTGTGAAGGTTGTGTCTGGCATCCAT
GAAGGAGGAACTGGCATGATTGTCAAAGTTGATCAGCATATGCTTATCATTCTGTCTGATACAACCAAAGAACATGTAAG
GCATATTTTGTTTAAGTTGTGTGTTAATTTCTGACAAGGGTAATATAACGCATGGGGATGATATTTTATATGTAGATTTG
CGTCTTCGCTGATCATGTTGCCAAGAGTGCAGAAGTGACTAAAGGTGTCACAAAAATTGGGGACTATGAACTTCATGATC
TTGTGATTCTAAGGTAAGTTGAATGCGCCCAACCACCTCTAATTGATATCATTTCTATCGGTATGATAGCTTTATATTAC
ACGATGCAGTGACTTTAGCTTTGGAGTAATCCTAAAACTTGATAGTGAAGCTATCCAGGTAACTTACCAATCATACAAAT
GCCTCTTATCATGTCAATGCTATAATGTTATTATTTATTTCAAGATTTGCTGTAACTCCATTTTATTTCAGATTCTTAAA
GGGGTTCCTGACAGCTCAGAGGTCTCTATTGTCAAAGCCAGCGAAATAAAATACAAAATTTGGAAGAAAATCAATGTGCA
AGACCGTTACAAAAATGTCGTCGCGGTGAAAGATGTTGTCAGGGTCATTGAGGGTCCTAGCAAAGTGAGTTCCTTTGCAG
TCTGGTCGTTTTTTTGTTAGCAAACTCTTTAAATATCATTTGATAAGTCTTATACCGATTTATATATTTGTGATAGGGTA
AACAAGGTCCAGTGGTGCAAATCTACAAAGGAGTGTTGTTTATACATGACCGGCATAACCTTGAACACACTGGATTTATC
TGCACTAGATGCTCATCTTGTGTTCTTGCTGGTGGCAATTTCAAGACACCAGCCCTGGTTCCTCCATCTCCAAGGAGATT
CCAACGGGCAGACATGGGATATAACCGTATGTCAGATTTCTTCGTATTATTTTGGTTCTTTATTCTTGACTCGTCCAGTG
CATGTTAAAGAGGGGCCCCCCTACGTATGACTTGTAAATAGGTTTAGTCTGAAACTGTTATGCGTAACTTAGAATGCATT
CGTTTACTGCAGCTGGAGCTGGAGGGAGACATCAGGGTGGACGAGGGAGAAGGGGTGACGATCATTTGGTAGGTACTTAT
GTCAAAATTCGTCTGGGGCCTTTCAAGGGATATAGTGGGCGTTTAGTTGAAGTCAAAGATAAGCTAGTGCGTGTGGAACT
TGAGGCCAAGATTGTGACAGGCAAGCTCCACTGTAATTTCACTTCTATTCACAGCTGGTTGCTGAATGTTGAATGAATTC
TAACTCTTTTTGTATGAACAGTTGAGCGGAAGGCGATATCAGATATGACTGATAATGTAGTCGCAACCCCGCAGTATAAT
ATGGGAAGCCAAACTCCTATGCATCCTTCCCGGACTCCACTTCATCCCTGTATGACTCCAATGCGGCATTCTGGAGGTTT
GTCACCTTAATTTCGCAGTTTCAAGATCCAATCATTTGTTTGTGTTTTTGTTTCTCATTTGACAACATGTTTGATATGTT
TATGTAAAAAATTCAGCTACACCTATCCATGATGGAATGAGGACACCTATGCGTGGTAGAGCTTGGAATCCTTACATGCC
TATGAGTCCTCCTAGGTACTTTAACATGGCCACTCTTCATTTATTCCCATAAATATTTCACATTCTGAGCAAGTGTCTCA
AACCAAAATATGGTTGTTGTGTCTCAGGGATAACTGGGAAGATGGGAACCCGGGATCATGGGGAACAAGTCCATATGAAG
CAGCTACGCCTGGATCAGATTGGGGTAGTAGTACTCCTGGTCGTAGTAGTTACAGAGATGCCGGAACACCAATAAACAAT
GGTTTTGTCTACTACCTTTTATGCCTTAACGGTTTCTTGCTTTGACGAATCTTATTCTCACACACTTTTCTCATGCAGCT
AATGCCCCAAGTCCTATGACACCAAGCTCAACTTCCTACTTACCTACCACACCCGGAGGACAAGCAATGACTCCTGGAAC
CGATCTCGATGTCATGTCTCTTGATATAGGTGCCTGCCTATCTCTTAGTTTTATACCATTGGTGTTTTTGATTCTCATAT
TCTTAACTCTACCAGGTGGAGATGCAGAAACCAGGTTCATACCCGGTATATTGGTCAATGTACACAAAGCTGGAGAGGAT
AGAAATCCCGGTGTTATTCGAGATGTTCTTCCGGTTTGTCCTCTTTAAACTACACAGAAGAATGTTGTATTGGAGTAAAC
ATTTTCCAGTTTACTGATTATGTAAGCCTCTTTTTCCTTTGTGGTCATCATCAGGATGGCTCCTGTGTAGTCGCACTTGG
ACACAGAGGTGAAGGCGAGACGATAAGAGCGACACAGAACAAAGTGAGCCTAGTTTGTCCGAAGAAGAACGAACGTGTGA
AGATTCTTGGAGGCAAGTATTGTGGTTCAACAGCTAAGGTCATTGGTGAGGACGGTCAGGACGGTATAGTTAAGCTAGAT
GAAAGTCTCGATATCAAGATATTGAAGCTGACTATATTAGCCAAGTTAGTTCATGAGTGACCCCATTAGGATCGTTTATA
TTTTGCTAATTAATTACTCTTTACATAACATTCTTGAGAT