Basic information from miRBase |
hairpin accession number: MI0000192 |
Located between position 19009094 and 19009182 on chromosome 5 strand - |
mature miRNAs for MI0000192: |
ath-miR160c (MIMAT0000180): TGCCTGGCTCCCTGTATGCCA |
You can find this miRNA in EMBL: (accession: AJ493634) |
>promoter (3kb upstream pre-miRNA, by PMRD):
TACTACCATCGATCTAGCAGTTGGGTAGCTACATCGAAAATCATGCTTAGCCAAACAGATTTCTAAAACCATAATTACAC
AAGCATGGGATATAGGTATCCAAATTTCATCAGAAAAGAGAGTAACCTCCAGCCTTTACCGTAACAAAAACGAGGATGTG
TTTGGAGAAACATTGAACTGAGGACACTCAACACTTCTCTTAGATATTTTATGGCAGAGGAGTAGATAGCCAAGCCAATT
AAATAACCAAATTCGCCAAAAAACAAAAATTAACGATTCCACAGCACAATTATAACCTGGCATAAGTTGAAATATATTAC
ATGTGACTTCCAGAAATTAACCATTCCACATCACAATTATAAGAAACATCTTTTTTTTTTGGTTTCACCGATATTACCAT
ATTCTTTTGATTGTCTTGTCGTTGTGTTGTACAATTTCCATTCCGACAATAGTGGAAAAGAAAAATTGTAAGTCTGTGAC
GTCTACTGTGACTAGTGACTACATCCAAAAAAAATTAGAGTCACTTCAAAGCTTATATAATTTAGGCATTACAATCTGAT
TGTCCATCCCTACATATTTTTTGATTTTTTTCCTCAAACATAAATACAAGAAAATAAAATTGTATTACTAAAAGTACACT
TATGTAACTTTATCGGTATAGGAAATTTTACAAAAAGAATGCATCTTAAAATCTCATATTCAAAAGTTGTGCTATTAGGG
AGGAAGCTAATCTAACTCCCTTTGATCTCCGTCCGTGGGAAGTATAACCTAAAAATTCATAATTTTTTGGGGAGAAAAAT
AAAAAGAACAAGTACAATTTTATTAGTTAAAATAATTTATATGGACTTTTTCCGCGATGATGCATGTTGTTTTGAAAGTT
GATCTCACCAAGATCACTAGGAACCGTGGAAATCGGAGCGGAAACCGTTGTTCAAATTTATCGTTTCTTTTGCTCTATAC
CATGTTTAAGAATGGTAGTATGATGAATTGACCTTATCCAAGAAACCCTTAAGCTAAGGTTTGAGAAGTCTTTTCTTTAT
GGAAATTTGAGGTAATGAATCCAGTTTCAAGGTTACTTTAGTTGGGCGTCGATGATTCTCGAATCCTTTGCTTTCTTTAA
GGATTTCGGTTTCAAGATTTGTGATACCAGTTTTTCCACAAAAGACTCGACTACGGCTAATGGATCGCGAGATATTTTTC
TCTGCCTACTTGCAACCACCTGTTTTTTGCGACCACCTGTTTTAGGTACAAGTGTTTTGACACTTTAGCCAAAAGTTTGG
AACTTCAAAACCACACGAAATCTTATACGTTTCGTGAGACAATGTATCTCAAGGTGGATGACATTCTGTCATCGTTAAGT
TTATGCCATATTAAGTGGTCTACTCCCTCGGTAGAACCCACTATCCTTAGGATCTCTACTCTCTAGATCCGTTTTTTATT
CTCTAGTAGTAATTTTTTGATGTTTCAATATGTATAGGTGTTTCGACTATTTATAGAAAAAGCAACCTTTGGAAACATCT
ATGAAAGTTCATTGGTCTATGTTTGGTTCTTCTTACCGGAAAATCTCATCCATATAGCTTATCAAAATGGAGTATTGTTG
AGAAAAAACACTAACTTTGTAAGAAATGTTTACTATGCCTAAACGGTCTATTTCTCCACGAGAAGTATCATATCATGCCA
GATAGAGCTCAAACTTTAACCTCAGTGTATATATCCATGAAATGATAGTTATATTCCTATTTCCCCTTGAAACGAAAGTT
CCATAGCTAAATGTCCCCAAATCTGGATTTAGTCGGTTTGATGCATAAACCCGAGACCAAACCATCTATTGATAGTAACT
AAACCAAAAAAAAACTGATTGCTTATTGAACCCGACCCAATATGCGTTTAAACCCTAAAATTCAAAATCCCCAAAGAGAA
CAAGACAAAACATGTTAATTCCACCCATATATTTACGTGAAAATCATAAATAAACTCATGGACATACACACGCACTCAAT
TCATCCGATGGGTAGTGTTAGATATCTCTGTTTCAATCATTGTGAAATTCTCTGTTTCCAAGCTTTGTTTTTTGCTTCAA
TGGTGGTGATGATGCTTATGTGACAGTAAGCTCGACTTTTTTTTAAGACGTTTGTCTCTTCTTTATAAAACTGTGTATTG
TTTTATGCAAGTAACAATTCAGATATCAATCGAAAGAGCTTGAAAGAAGAAATAGCTCTAGCAAATTATTGATATAAAAA
CCAAGTTTCACAGAATTGAGAAAAGAGAGATAAAACTCTTAACGTGTTCATGAATGAATGAGAAGCTAACAACAATTGCC
ATTATAGTAAAAGGAAAGCATTTAGAAAAAAGGAAAACACAAGATTTTTTGTCACGTGAGAGTTTTGCCACATCACCACT
CATTTTTCCTGCAACAAGTCGTCACTTCTCTTCTTTCCTGTAACAATTTAGTGGGTATTAATGTGTTTTTTGGATATTGA
AAATCGTCTTCTTCTTTCTCACACCATGGCTGAAAAGGAACCCCACCACTCATACTTCAATTTGTTCGATAAAAACAATT
CGCAACCCAACATTTCCAAACTCAATCTAACCATTACAGAACATCAACGACATATTATCCACCAAATCTCTTTTCTCTCT
AGGGTTCGTCGATTTTGGGGGGTTTTAATATTTTCAATTTGGGAATTTTTTATGGGGTTATAGAACTGAAATCGGGTTAA
AAACGGCTGAATTACGGTTAAGTCTGGTTATAATTAGGTTTAGTTGGTTTATCAATCGGTAAGATATAGAGTAAACCGAC
TAAACCCAGTTCCGTGGGGTTATGGATCTTGAACTATTTATTCGGGGACATATAGCTATGAAACTTTCCTTTCAGGGGGA
AATAAGAGTATAACTATCAATTCATAGATATATAGACTGAGGTCAAAGTTTGTGTTCTATCTGGCATGATGTGATACTTC
TCGTGGGGAAATAGACCGTTTTTCCCATTTTGTACTTATA